Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-386P-201ENST00000362650 107 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 Y_RNA.110-201ENST00000363220 99 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 RBMY2QP-201ENST00000429799 1147 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 RPL31P53-201ENST00000457065 348 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC008033.2-201ENST00000542626 177 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC022726.1-201ENST00000587475 207 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC087763.1-201ENST00000603391 286 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 EIF3FP1-201ENST00000613970 806 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC016769.4-201ENST00000616893 535 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AL162233.1-201ENST00000620014 944 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC097461.1-201ENST00000568928 2821 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AL445487.1-201ENST00000415694 1580 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 CASC19-255ENST00000641733 1385 ntBASIC5.16□□□□□ -1.58
SIX2Q9NPC8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.15□□□□□ -1.58
SIX2Q9NPC8 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.15□□□□□ -1.58
SIX2Q9NPC8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SIX2Q9NPC8 IRF5P1-201ENST00000504852 2164 ntBASIC5.15□□□□□ -1.58
SIX2Q9NPC8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SIX2Q9NPC8 AC092642.1-201ENST00000392417 425 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 OR1F12-201ENST00000402365 945 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AL512504.1-201ENST00000415494 778 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 OR2AM1P-201ENST00000422137 422 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC112498.1-201ENST00000444401 332 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC010733.1-201ENST00000451515 401 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AURKAPS2-201ENST00000454983 333 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 CYCSP53-201ENST00000455540 265 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 RNU7-157P-201ENST00000459600 66 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC112206.1-201ENST00000468416 477 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 GAPDHP56-201ENST00000506031 988 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC011411.1-201ENST00000509592 876 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC019227.1-201ENST00000526902 510 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 OR10G5P-201ENST00000532733 358 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC012414.2-201ENST00000559474 187 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 PCA3_2.1-201ENST00000612507 409 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 AL672167.1-205ENST00000641112 3080 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 BX284613.1-201ENST00000452221 1641 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SIX2Q9NPC8 INTS6P1-201ENST00000504674 2530 ntBASIC5.15□□□□□ -1.59
SIX2Q9NPC8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 AL121950.1-201ENST00000624993 2077 ntBASIC5.14□□□□□ -1.59
SIX2Q9NPC8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 CHMP1B2P-201ENST00000399581 597 ntBASIC5.14□□□□□ -1.59
SIX2Q9NPC8 RN7SKP213-201ENST00000410746 298 ntBASIC5.14□□□□□ -1.59
SIX2Q9NPC8 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 RPL23AP27-201ENST00000415161 451 ntBASIC5.14□□□□□ -1.59
SIX2Q9NPC8 RPL12P43-201ENST00000420608 499 ntBASIC5.14□□□□□ -1.59
SIX2Q9NPC8 OR2B7P-201ENST00000429302 934 ntBASIC5.14□□□□□ -1.59
SIX2Q9NPC8 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX2Q9NPC8 SLC25A18P1-201ENST00000449385 454 ntBASIC5.14□□□□□ -1.59
SIX2Q9NPC8 MYO5BP2-201ENST00000449815 1277 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms