Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 OR52I1-201ENST00000450052 1050 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC091959.2-201ENST00000477363 321 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC109486.1-201ENST00000486833 374 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 RN7SL568P-201ENST00000493069 298 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 MTND2P33-201ENST00000506452 1031 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC093815.1-201ENST00000508637 280 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC093281.2-201ENST00000510153 597 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC010343.2-201ENST00000510162 224 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 MT1CP-201ENST00000567054 174 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AP001267.4-201ENST00000602598 545 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 NDUFA8P1-201ENST00000605525 367 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC011374.2-201ENST00000607135 526 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 MFSD8-245ENST00000641743 948 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 NCOA4P2-201ENST00000340589 1813 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC027575.3-201ENST00000583058 2747 ntBASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.6□□□□□ -1.51
SEC61A2Q9H9S3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AL592429.1-201ENST00000403909 1473 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC005539.1-201ENST00000443768 1479 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 RNY4P24-201ENST00000362735 96 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 RNU6-797P-201ENST00000363101 109 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 RN7SKP237-201ENST00000364663 301 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 OR1L1-202ENST00000373686 1083 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 BTF3P7-201ENST00000407097 488 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 RN7SKP161-201ENST00000411110 305 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 NRBF2P2-201ENST00000413087 861 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC010975.2-201ENST00000427781 588 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC122718.1-201ENST00000439448 744 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 ST13P20-201ENST00000447996 1065 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC093392.2-201ENST00000450682 337 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 FAM133DP-201ENST00000464802 691 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 CCDC11P1-201ENST00000503137 1162 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 WBP1LP4-201ENST00000505043 344 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 PRELID3BP4-201ENST00000515476 571 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 RNU6-718P-201ENST00000516166 105 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 RNA5SP206-201ENST00000516703 121 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 SMARCE1P4-201ENST00000523647 241 ntBASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A2Q9H9S3 ADI1P3-201ENST00000549509 470 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms