Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC069277.2-201ENST00000454211 432 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AL445669.2-201ENST00000454425 421 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC104629.2-201ENST00000468627 598 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 RPL7P40-201ENST00000481703 745 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC012123.2-201ENST00000485809 248 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC023424.1-201ENST00000496058 459 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC004980.4-201ENST00000513375 203 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AL390726.5-202ENST00000564800 256 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AGGF1P5-201ENST00000567900 919 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC015911.5-201ENST00000587076 451 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC107993.1-201ENST00000591343 684 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC013444.2-201ENST00000603317 787 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AP006248.3-201ENST00000623580 594 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC026422.1-201ENST00000623961 452 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AC073342.3-201ENST00000624211 193 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 AP003399.1-201ENST00000637534 361 ntBASIC5.49□□□□□ -1.53
EBF3Q9H4W6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
EBF3Q9H4W6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AL645568.2-201ENST00000432815 1337 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AL022311.1-201ENST00000623726 19416 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC006206.1-201ENST00000544842 3387 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 DPPA2P2-201ENST00000418220 897 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 MTCO2P20-201ENST00000437339 673 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 TCEA1P3-201ENST00000443005 880 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC092647.2-201ENST00000452998 253 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 snoU13.20-201ENST00000459180 104 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC058823.1-201ENST00000485315 474 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 FTH1P11-201ENST00000517577 551 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC023538.1-201ENST00000534576 736 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 BNIP3P24-201ENST00000593398 557 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 ELOCP35-201ENST00000604289 336 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 OR7M1P-201ENST00000608946 533 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 U6.48-201ENST00000618523 106 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 AC004808.1-201ENST00000627671 721 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.48□□□□□ -1.53
EBF3Q9H4W6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.48□□□□□ -1.53
EBF3Q9H4W6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 MIR600-201ENST00000385007 98 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 U3.28-201ENST00000391249 210 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 CHMP1B2P-201ENST00000399581 597 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.47□□□□□ -1.53
EBF3Q9H4W6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.47□□□□□ -1.53
EBF3Q9H4W6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms