Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 MTND4P8-201ENST00000514997 1362 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 SCARNA6.1-201ENST00000516989 238 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC021678.3-201ENST00000517893 476 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC083923.1-201ENST00000523708 376 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC111188.2-201ENST00000529697 1387 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 OR4A43P-201ENST00000532938 908 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 VPS35P1-201ENST00000563400 1518 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC007342.5-201ENST00000571340 2142 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC005412.1-201ENST00000580812 1049 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC009948.4-201ENST00000604692 675 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC097478.2-201ENST00000610572 514 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AL138478.1-201ENST00000612252 832 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AL035661.1-201ENST00000620459 1144 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 CU459211.1-201ENST00000635667 749 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 RNU6-543P-201ENST00000362576 108 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 RNU6-353P-201ENST00000364266 108 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 SNORA62.2-201ENST00000364672 152 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 MIR1203-201ENST00000408812 85 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 MRPL53P1-201ENST00000414323 319 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 OR10T1P-201ENST00000424327 947 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 FTLP19-201ENST00000433300 394 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 RPS23P9-201ENST00000448848 438 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC087672.1-201ENST00000479876 766 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 RPL7P40-201ENST00000481703 745 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 RNA5SP473-201ENST00000516402 125 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC139365.2-201ENST00000517972 253 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC023050.2-201ENST00000544968 387 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AGGF1P7-201ENST00000562369 913 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC096996.1-201ENST00000563813 325 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AL022394.1-201ENST00000606979 292 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AL445423.1-201ENST00000609941 536 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC007786.3-201ENST00000615154 596 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AP003497.2-201ENST00000624220 967 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AC079416.3-201ENST00000624479 549 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AL390318.1-201ENST00000624564 687 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 LINC02019-201ENST00000608605 2060 ntBASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM54Q9BYV2 AL137100.1-201ENST00000556703 1620 ntBASIC5.59□□□□□ -1.51
TRIM54Q9BYV2 AC083843.2-201ENST00000568248 6253 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms