Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC064862.4-201ENST00000442180 334 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 OR6C72P-201ENST00000451403 892 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AL121877.1-201ENST00000453704 622 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AL356390.1-201ENST00000455684 397 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 RPL5P30-201ENST00000465511 891 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC006967.1-201ENST00000467608 589 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 RN7SL170P-201ENST00000487098 295 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 Y_RNA.719-201ENST00000517156 106 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC134349.2-201ENST00000535136 910 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC069307.1-201ENST00000602820 447 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC022387.2-201ENST00000604050 448 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC100767.2-201ENST00000604840 693 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC117490.2-201ENST00000610042 594 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AL162574.2-201ENST00000614618 657 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC234782.5-201ENST00000617723 324 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 MTND5P23-201ENST00000430812 1655 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 AC091305.2-201ENST00000624049 1576 ntBASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC28BQ9BUN5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 RN7SKP124-201ENST00000364730 341 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 RNU1-77P-201ENST00000390868 162 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 ATP5F1P2-201ENST00000398143 760 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 U3.35-201ENST00000408405 208 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC005033.1-201ENST00000428904 813 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 PPIAP13-201ENST00000434706 478 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC015864.1-201ENST00000496512 544 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 RNA5SP392-201ENST00000516905 112 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 RNU6-943P-201ENST00000516960 98 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 TOMM20P1-201ENST00000534518 427 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC027243.2-201ENST00000602530 724 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 IMMP1LP3-201ENST00000604197 224 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 SUGT1P3-202ENST00000604259 383 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AL356752.1-201ENST00000615844 593 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC090527.3-201ENST00000619041 548 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 EOGT-210ENST00000615922 1931 ntBASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
CCDC28BQ9BUN5 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms