Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 COX6CP15-201ENST00000426313 211 ntBASIC7.77□□□□□ -1.17
IFT140Q96RY7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 AC099670.2-201ENST00000435130 321 ntBASIC7.77□□□□□ -1.17
IFT140Q96RY7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC7.77□□□□□ -1.17
IFT140Q96RY7 HNRNPRP2-201ENST00000528421 743 ntBASIC7.77□□□□□ -1.17
IFT140Q96RY7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.77□□□□□ -1.17
IFT140Q96RY7 AC107068.1-201ENST00000563286 4218 ntBASIC7.77□□□□□ -1.17
IFT140Q96RY7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.77□□□□□ -1.17
IFT140Q96RY7 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
IFT140Q96RY7 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
IFT140Q96RY7 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 RNU1-130P-201ENST00000363930 160 ntBASIC7.76□□□□□ -1.17
IFT140Q96RY7 RNA5SP283-201ENST00000365604 119 ntBASIC7.76□□□□□ -1.17
IFT140Q96RY7 AL451142.1-201ENST00000375867 775 ntBASIC7.76□□□□□ -1.17
IFT140Q96RY7 AL356095.1-201ENST00000417217 199 ntBASIC7.76□□□□□ -1.17
IFT140Q96RY7 RPL21P89-201ENST00000444021 467 ntBASIC7.76□□□□□ -1.17
IFT140Q96RY7 ENPP7P11-201ENST00000505915 627 ntBASIC7.76□□□□□ -1.17
IFT140Q96RY7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 RN7SL290P-201ENST00000578661 300 ntBASIC7.76□□□□□ -1.17
IFT140Q96RY7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 AC073137.1-201ENST00000605636 634 ntBASIC7.76□□□□□ -1.17
IFT140Q96RY7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
IFT140Q96RY7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.76□□□□□ -1.17
IFT140Q96RY7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
IFT140Q96RY7 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 YY1P1-201ENST00000427625 668 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 AC079804.1-201ENST00000461922 436 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 AC108064.1-201ENST00000513791 460 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 AC027369.5-201ENST00000533838 755 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 CDRT1-208ENST00000630868 794 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
IFT140Q96RY7 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
IFT140Q96RY7 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.75□□□□□ -1.17
IFT140Q96RY7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
IFT140Q96RY7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
IFT140Q96RY7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
IFT140Q96RY7 OR1L6-202ENST00000373684 1044 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 RPL23AP2-201ENST00000471227 466 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
IFT140Q96RY7 OR4A2P-201ENST00000527276 913 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 MTCYBP13-201ENST00000578634 1093 ntBASIC7.75□□□□□ -1.17
IFT140Q96RY7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.75□□□□□ -1.17
IFT140Q96RY7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
IFT140Q96RY7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
IFT140Q96RY7 MAPK10-328ENST00000641553 4009 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
IFT140Q96RY7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
IFT140Q96RY7 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
IFT140Q96RY7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
IFT140Q96RY7 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
IFT140Q96RY7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
IFT140Q96RY7 OR5P1P-201ENST00000299512 925 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 RNU1-132P-201ENST00000364300 164 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 RPS27AP11-201ENST00000402798 447 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 QRSL1P2-201ENST00000418582 964 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 RPL6P5-201ENST00000445678 828 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 AC090058.1-201ENST00000498788 435 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 AC021193.1-201ENST00000511607 420 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 AP000889.1-201ENST00000530968 660 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 AC010547.7-201ENST00000570323 333 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 AL161756.2-201ENST00000604597 246 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 AP003497.2-201ENST00000624220 967 ntBASIC7.74□□□□□ -1.17
IFT140Q96RY7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.74□□□□□ -1.17
IFT140Q96RY7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
IFT140Q96RY7 VN2R3P-201ENST00000422626 1412 ntBASIC7.73□□□□□ -1.17
IFT140Q96RY7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.73□□□□□ -1.17
IFT140Q96RY7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.73□□□□□ -1.17
IFT140Q96RY7 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
IFT140Q96RY7 RNA5SP241-201ENST00000391326 114 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms