Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RPS27AP2-201ENST00000457576 465 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 RN7SL717P-201ENST00000478343 297 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC022215.1-201ENST00000481770 362 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 RN7SL101P-201ENST00000496350 279 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC025459.1-201ENST00000504072 156 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 RNU6-1308P-201ENST00000516817 103 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 OR10V3P-201ENST00000525712 725 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC022404.1-201ENST00000555320 273 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC006530.1-201ENST00000555980 571 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC010547.6-201ENST00000571789 193 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 MIR4789-201ENST00000577469 82 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 ELOCP35-201ENST00000604289 336 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC025811.1-201ENST00000604312 472 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC073387.2-201ENST00000604797 784 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 MIR6862-1-201ENST00000613016 70 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 MIR6862-2-201ENST00000614755 70 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC004232.3-201ENST00000622977 525 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC132825.7-201ENST00000638744 335 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 MIR193BHG-214ENST00000641765 509 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AL078621.3-201ENST00000623707 2042 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 FBXL21-201ENST00000297158 1305 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 PCAT14-202ENST00000627127 3935 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 RBPJP2-201ENST00000618187 1444 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 MT-TP-201ENST00000387461 68 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC064862.4-201ENST00000442180 334 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC023141.8-201ENST00000442554 208 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 ABCC13-202ENST00000463099 3842 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 MTCO2P6-201ENST00000463134 685 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 RPL7AP10-201ENST00000481016 791 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 METTL15P1-201ENST00000481421 1045 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 RN7SL273P-201ENST00000481561 299 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 RPL38P3-201ENST00000484463 213 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC010627.1-201ENST00000503819 1294 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 CDH12P2-201ENST00000504393 298 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 SNORA31.13-201ENST00000516624 135 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 HIGD1AP18-201ENST00000520730 278 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AP003717.3-201ENST00000544832 1180 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 ZNF971P-201ENST00000562068 1249 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 MIR4472-2-201ENST00000582069 67 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC027243.2-201ENST00000602530 724 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms