Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 OR2L1P-202ENST00000641567 1023 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 AL118496.1-201ENST00000440201 1812 ntBASIC5.2□□□□□ -1.58
VMP1Q96GC9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VMP1Q96GC9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
VMP1Q96GC9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 AC009501.3-201ENST00000605001 1352 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 AL121886.1-201ENST00000358609 435 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 RNA5SP319-201ENST00000362768 119 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 RNA5SP132-201ENST00000364725 118 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 RNU6-40P-201ENST00000384254 107 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 CCNB2P1-201ENST00000399411 1150 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 HSPD1P16-201ENST00000402302 394 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 RPL31P52-201ENST00000407532 367 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 GAPDHP49-201ENST00000421421 961 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 AC079355.1-201ENST00000421770 223 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 VTA1P2-201ENST00000520205 911 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 NOP56P3-201ENST00000549457 385 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 SUMO2P14-201ENST00000604488 293 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 AC025175.1-201ENST00000606482 759 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 AL162233.1-201ENST00000620014 944 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 OR51H2P-202ENST00000641424 3046 ntBASIC5.19□□□□□ -1.58
VMP1Q96GC9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.19□□□□□ -1.58
VMP1Q96GC9 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VMP1Q96GC9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 MTCO1P11-201ENST00000429111 1528 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 RN7SKP6-201ENST00000364795 319 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 U3.28-201ENST00000391249 210 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC005042.1-201ENST00000393397 800 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 COX5BP7-201ENST00000414780 274 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 Z93019.1-201ENST00000416450 973 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 SEC63P1-201ENST00000425785 1258 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 IPMKP1-201ENST00000425988 855 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 RPS4XP16-201ENST00000427198 791 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 OR6D1P-201ENST00000436165 939 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AL390119.1-201ENST00000440329 312 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AL596266.1-201ENST00000448132 400 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 TPT1P1-201ENST00000458495 518 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC018638.3-201ENST00000461273 132 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 RN7SL51P-201ENST00000468230 285 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC113430.1-201ENST00000506872 718 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC016559.2-201ENST00000510759 359 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 RN7SKP99-201ENST00000517028 307 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC007225.2-201ENST00000562529 256 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 VN1R84P-201ENST00000593697 235 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC015802.5-201ENST00000607478 399 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AL096803.3-201ENST00000609032 532 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 AC132068.1-201ENST00000623805 459 ntBASIC5.18□□□□□ -1.58
VMP1Q96GC9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms