Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC007448.1-201ENST00000582714 234 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 SUGT1P3-202ENST00000604259 383 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AL049844.2-201ENST00000604280 628 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC079610.2-201ENST00000604818 690 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AC010435.1-201ENST00000623353 1177 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AP001002.2-201ENST00000625137 386 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 AL121950.1-201ENST00000624993 2077 ntBASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.54□□□□□ -1.36
CHMP4CQ96CF2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 CIR1P2-201ENST00000514821 1342 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 RNU6-207P-201ENST00000384137 107 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 MIR142-201ENST00000384835 87 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC104297.1-201ENST00000393779 870 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC007161.1-204ENST00000423039 460 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 FO393419.3-201ENST00000428741 282 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC008953.1-201ENST00000497334 318 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC010374.1-201ENST00000503762 1237 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 SUMO2P5-201ENST00000506790 245 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC018618.2-201ENST00000604770 446 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AL118522.2-201ENST00000616045 615 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC084824.4-201ENST00000620106 731 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC132825.7-201ENST00000638744 335 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC073869.7-201ENST00000640874 297 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 AC119674.1-212ENST00000641155 993 ntBASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CHMP4CQ96CF2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
CHMP4CQ96CF2 AL627171.1-201ENST00000618845 1308 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 RNA5SP319-201ENST00000362768 119 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 RNU6-244P-201ENST00000391028 104 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 GPS2P1-201ENST00000411761 986 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC010385.1-201ENST00000412374 256 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 Z93019.1-201ENST00000416450 973 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 EIF4A1P1-201ENST00000420241 934 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 TCEA1P2-201ENST00000420496 906 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 OR6K4P-201ENST00000423179 955 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC009784.1-201ENST00000426484 460 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 VTI1BP4-201ENST00000427516 527 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 MTND2P40-201ENST00000436718 841 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 RN7SL515P-201ENST00000463999 297 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC107015.1-201ENST00000466902 747 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 RN7SL51P-201ENST00000468230 285 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC090638.1-201ENST00000498296 909 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC021451.1-201ENST00000523498 1129 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC007225.2-201ENST00000562529 256 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms