Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AL031313.1-201ENST00000448435 256 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AL139824.2-201ENST00000458731 1095 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 RPS23P6-201ENST00000466136 431 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AL117692.1-201ENST00000494283 713 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC093720.1-201ENST00000505681 714 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 RNU6-615P-201ENST00000516065 106 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 MRPS16P1-201ENST00000523462 412 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AL390334.1-201ENST00000556395 450 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 MTCYBP13-201ENST00000578634 1093 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC015802.2-201ENST00000589690 189 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC011374.2-201ENST00000607135 526 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC244107.2-201ENST00000611773 76 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC022079.2-201ENST00000619739 566 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC073869.7-201ENST00000640874 297 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHFQ7M4L6 AC107021.2-201ENST00000567714 2095 ntBASIC4.87□□□□□ -1.63
SHFQ7M4L6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SHFQ7M4L6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHFQ7M4L6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHFQ7M4L6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHFQ7M4L6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHFQ7M4L6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHFQ7M4L6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHFQ7M4L6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHFQ7M4L6 RNU5B-1-201ENST00000363286 116 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 RNA5SP131-201ENST00000365452 119 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AL603865.2-201ENST00000401679 213 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC211486.3-201ENST00000412694 621 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AL450996.1-201ENST00000445574 1202 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 Z95152.1-201ENST00000453556 656 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 RPS27AP16-201ENST00000492222 470 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 NIFKP7-201ENST00000503365 834 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC092349.1-201ENST00000504903 310 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC098976.1-201ENST00000513014 541 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC060775.1-201ENST00000518241 520 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC027369.5-201ENST00000533838 755 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC068305.2-201ENST00000550567 1205 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AL132857.1-201ENST00000555180 708 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 DPPA2P4-201ENST00000563717 878 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AL390726.5-202ENST00000564800 256 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 MIR4789-201ENST00000577469 82 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC127024.5-201ENST00000580085 462 ntBASIC4.86□□□□□ -1.63
SHFQ7M4L6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.86□□□□□ -1.63
SHFQ7M4L6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms