Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 RPL7P41-201ENST00000485823 957 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AC090543.1-201ENST00000492168 485 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 RPS24P16-201ENST00000497294 392 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 HMGN1P9-201ENST00000515212 298 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 MIR5096-201ENST00000583713 70 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AP001267.4-201ENST00000602598 545 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AC092474.3-201ENST00000603022 568 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AC083809.1-201ENST00000615051 472 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 MIR6758-201ENST00000620653 63 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 SAMMSON-226ENST00000642089 1582 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 RNA5SP191-201ENST00000362585 102 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 CCNB2P1-201ENST00000399411 1150 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 SNORA11-201ENST00000408789 128 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AF186996.5-201ENST00000418098 904 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 MTCYBP7-201ENST00000419540 1134 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC069213.2-201ENST00000420238 366 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC090018.1-201ENST00000434369 367 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AL691517.1-201ENST00000440833 1235 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 VN1R48P-201ENST00000448149 1036 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 IGHV5-78-201ENST00000450948 295 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC009963.2-201ENST00000453431 138 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC011005.3-201ENST00000491624 395 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC034205.1-201ENST00000520621 638 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AL133247.2-201ENST00000603236 482 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC074140.1-201ENST00000621617 208 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AP003499.2-201ENST00000624100 483 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AP001153.1-201ENST00000641024 338 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 DDX6P1-205ENST00000441966 1436 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC092070.2-203ENST00000598377 3644 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 AC099654.2-201ENST00000433031 1980 ntBASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD4Q5XG99 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 AC083899.1-201ENST00000454465 3819 ntBASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 MUC2-202ENST00000613187 4845 ntBASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 AC126755.2-208ENST00000327792 462 ntBASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 AC138969.1-213ENST00000331436 462 ntBASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 RN7SKP186-201ENST00000365371 303 ntBASIC5.01□□□□□ -1.61
LYSMD4Q5XG99 SNORA40.4-201ENST00000390971 128 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 300.4 ms