Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC231759.1-201ENST00000616455 597 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AP002791.1-201ENST00000623291 381 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 PDZK1P1-202ENST00000425209 1350 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 AC005261.4-201ENST00000600047 1385 ntBASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC144BQ3MJ40 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CCDC144BQ3MJ40 AC104446.1-201ENST00000613728 1321 ntBASIC6.77□□□□□ -1.32
CCDC144BQ3MJ40 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC000367.1-201ENST00000452711 1766 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 RNY3P9-201ENST00000384727 106 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC016739.1-201ENST00000405359 345 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 OR3A2-201ENST00000408891 1076 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 RN7SKP17-201ENST00000411242 351 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 OR4K6P-201ENST00000416478 897 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 GAPDHP49-201ENST00000421421 961 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 RAC1P8-201ENST00000427086 527 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 RPL21P110-201ENST00000433345 446 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 MTCYBP35-201ENST00000503630 1137 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 MTCO2P15-201ENST00000532655 656 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AL390318.1-201ENST00000624564 687 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC019226.2-201ENST00000625973 424 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC087821.2-201ENST00000637086 450 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AL592429.1-201ENST00000403909 1473 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AC005224.3-201ENST00000584683 2140 ntBASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC144BQ3MJ40 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 RNU6-413P-201ENST00000384115 107 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AL049545.1-201ENST00000401856 572 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AL354868.1-201ENST00000417077 482 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC002504.1-201ENST00000438281 691 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC004263.1-201ENST00000479327 332 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 TRBV5-2-201ENST00000489095 273 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 EIF3LP3-201ENST00000495197 822 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC098799.3-201ENST00000506095 438 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC118282.2-201ENST00000508739 374 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC021106.1-201ENST00000509020 1058 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 IGJP1-201ENST00000522682 475 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC090888.2-201ENST00000559765 1144 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC090751.1-201ENST00000566966 267 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC016180.1-201ENST00000567945 403 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC104695.2-201ENST00000605056 775 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms