Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RAD1P1-201ENST00000231383 813 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 SNORA64.1-201ENST00000362600 132 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC234772.1-201ENST00000377927 937 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 RNU6-207P-201ENST00000384137 107 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AL034403.1-201ENST00000399414 885 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 MTCO2P31-201ENST00000402702 684 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 TATDN1P1-201ENST00000414123 891 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 MTATP6P20-201ENST00000414147 562 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AL662874.1-201ENST00000426065 230 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC093422.3-201ENST00000428506 305 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 MTCO1P43-201ENST00000431831 488 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A1P61619 RPS7P2-201ENST00000435134 607 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 SETP8-201ENST00000435341 628 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC093716.1-201ENST00000435923 377 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 MTCYBP29-201ENST00000436327 1006 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 PA2G4P6-201ENST00000438325 1197 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC245047.2-201ENST00000441060 530 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 EEF1B2P6-201ENST00000445713 673 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC044797.1-201ENST00000445744 679 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC092691.2-201ENST00000461787 803 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 RPL32P33-201ENST00000487023 394 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 RPS17P5-201ENST00000498293 408 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC109481.1-201ENST00000509173 282 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A1P61619 ASNSP4-201ENST00000511103 447 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC021193.1-201ENST00000511607 420 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC098976.1-201ENST00000513014 541 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.82□□□□□ -1.64
SEC61A1P61619 BUD31P1-201ENST00000521828 359 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A1P61619 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC127381.1-201ENST00000555979 939 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC010547.6-201ENST00000571789 193 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC011330.2-201ENST00000621680 635 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC004232.3-201ENST00000622977 525 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A1P61619 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A1P61619 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SEC61A1P61619 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A1P61619 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A1P61619 SMG1P4-204ENST00000523028 4131 ntBASIC4.82□□□□□ -1.64
SEC61A1P61619 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A1P61619 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SEC61A1P61619 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.81□□□□□ -1.64
SEC61A1P61619 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A1P61619 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.81□□□□□ -1.64
SEC61A1P61619 AC097063.1-201ENST00000426714 1797 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.81□□□□□ -1.64
SEC61A1P61619 MRE11P1-201ENST00000464884 2127 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SEC61A1P61619 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SEC61A1P61619 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A1P61619 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A1P61619 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A1P61619 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A1P61619 MIR323A-201ENST00000362199 86 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A1P61619 RNU6-1263P-201ENST00000384601 106 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 RNA5SP105-201ENST00000391123 113 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A1P61619 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 ATF1P1-201ENST00000406040 927 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 AL513325.1-201ENST00000417716 1034 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.81□□□□□ -1.64
SEC61A1P61619 AC079355.1-201ENST00000421770 223 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A1P61619 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A1P61619 NDUFB4P8-201ENST00000435351 367 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 AC092447.2-201ENST00000435487 669 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 OR7E116P-201ENST00000448529 957 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 AL122001.1-201ENST00000457027 370 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.81□□□□□ -1.64
SEC61A1P61619 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.81□□□□□ -1.64
SEC61A1P61619 AC023141.9-201ENST00000458734 412 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 SNORD11.1-201ENST00000459482 85 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.81□□□□□ -1.64
SEC61A1P61619 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A1P61619 AC022215.1-201ENST00000481770 362 ntBASIC4.81□□□□□ -1.64
SEC61A1P61619 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms