Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC015849.6-201ENST00000605454 474 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AL136295.6-201ENST00000610486 658 ntBASIC4.71□□□□□ -1.66
VSX2P58304 AC100827.5-201ENST00000615883 426 ntBASIC4.71□□□□□ -1.66
VSX2P58304 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.71□□□□□ -1.66
VSX2P58304 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VSX2P58304 AC021242.1-201ENST00000507315 2035 ntBASIC4.71□□□□□ -1.66
VSX2P58304 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VSX2P58304 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VSX2P58304 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VSX2P58304 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.7□□□□□ -1.66
VSX2P58304 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VSX2P58304 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VSX2P58304 SAMMSON-226ENST00000642089 1582 ntBASIC4.7□□□□□ -1.66
VSX2P58304 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VSX2P58304 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VSX2P58304 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
VSX2P58304 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VSX2P58304 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
VSX2P58304 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.7□□□□□ -1.66
VSX2P58304 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VSX2P58304 VDAC2P1-201ENST00000399358 958 ntBASIC4.7□□□□□ -1.66
VSX2P58304 RNU2-22P-201ENST00000411266 212 ntBASIC4.7□□□□□ -1.66
VSX2P58304 AL139128.1-201ENST00000413921 941 ntBASIC4.7□□□□□ -1.66
VSX2P58304 GTF2IP5-201ENST00000414608 731 ntBASIC4.7□□□□□ -1.66
VSX2P58304 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.7□□□□□ -1.66
VSX2P58304 TBCAP2-201ENST00000416175 326 ntBASIC4.7□□□□□ -1.66
VSX2P58304 QRSL1P2-201ENST00000418582 964 ntBASIC4.7□□□□□ -1.66
VSX2P58304 AC013268.2-201ENST00000420753 337 ntBASIC4.7□□□□□ -1.66
VSX2P58304 AC093414.1-201ENST00000434712 514 ntBASIC4.7□□□□□ -1.66
VSX2P58304 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.7□□□□□ -1.66
VSX2P58304 AC073052.1-201ENST00000440417 714 ntBASIC4.7□□□□□ -1.66
VSX2P58304 CYCSP24-201ENST00000445119 316 ntBASIC4.7□□□□□ -1.66
VSX2P58304 OR52J1P-201ENST00000450596 932 ntBASIC4.7□□□□□ -1.66
VSX2P58304 AC091685.2-201ENST00000454924 864 ntBASIC4.7□□□□□ -1.66
VSX2P58304 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.7□□□□□ -1.66
VSX2P58304 GAPDHP56-201ENST00000506031 988 ntBASIC4.7□□□□□ -1.66
VSX2P58304 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.7□□□□□ -1.66
VSX2P58304 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.7□□□□□ -1.66
VSX2P58304 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.7□□□□□ -1.66
VSX2P58304 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.7□□□□□ -1.66
VSX2P58304 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.7□□□□□ -1.66
VSX2P58304 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.7□□□□□ -1.66
VSX2P58304 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.7□□□□□ -1.66
VSX2P58304 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.7□□□□□ -1.66
VSX2P58304 AC020910.3-201ENST00000603701 874 ntBASIC4.7□□□□□ -1.66
VSX2P58304 FAM25E-202ENST00000608562 189 ntBASIC4.7□□□□□ -1.66
VSX2P58304 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.7□□□□□ -1.66
VSX2P58304 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
VSX2P58304 AC091953.3-201ENST00000623220 236 ntBASIC4.7□□□□□ -1.66
VSX2P58304 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.7□□□□□ -1.66
VSX2P58304 AC009950.2-201ENST00000636548 183 ntBASIC4.7□□□□□ -1.66
VSX2P58304 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.7□□□□□ -1.66
VSX2P58304 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VSX2P58304 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VSX2P58304 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.7□□□□□ -1.66
VSX2P58304 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VSX2P58304 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VSX2P58304 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSX2P58304 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSX2P58304 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 AC068446.1-201ENST00000556425 1549 ntBASIC4.69□□□□□ -1.66
VSX2P58304 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSX2P58304 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VSX2P58304 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 HMGB3P7-201ENST00000400214 611 ntBASIC4.69□□□□□ -1.66
VSX2P58304 AL357515.1-201ENST00000402967 542 ntBASIC4.69□□□□□ -1.66
VSX2P58304 AC233289.1-201ENST00000403700 508 ntBASIC4.69□□□□□ -1.66
VSX2P58304 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VSX2P58304 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.69□□□□□ -1.66
VSX2P58304 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.69□□□□□ -1.66
VSX2P58304 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 AC006466.1-201ENST00000438721 289 ntBASIC4.69□□□□□ -1.66
VSX2P58304 SLC25A18P1-201ENST00000449385 454 ntBASIC4.69□□□□□ -1.66
VSX2P58304 AC234781.3-201ENST00000452540 973 ntBASIC4.69□□□□□ -1.66
VSX2P58304 RPL23AP56-201ENST00000460778 453 ntBASIC4.69□□□□□ -1.66
VSX2P58304 RPS17P2-201ENST00000461663 408 ntBASIC4.69□□□□□ -1.66
VSX2P58304 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.69□□□□□ -1.66
VSX2P58304 AC090142.2-201ENST00000483263 416 ntBASIC4.69□□□□□ -1.66
VSX2P58304 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.69□□□□□ -1.66
VSX2P58304 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSX2P58304 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
VSX2P58304 MIR4480-201ENST00000582492 71 ntBASIC4.69□□□□□ -1.66
VSX2P58304 AL161912.3-201ENST00000605404 628 ntBASIC4.69□□□□□ -1.66
VSX2P58304 AC138627.1-204ENST00000641894 765 ntBASIC4.69□□□□□ -1.66
VSX2P58304 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSX2P58304 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VSX2P58304 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.69□□□□□ -1.66
VSX2P58304 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.68□□□□□ -1.66
VSX2P58304 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.68□□□□□ -1.66
VSX2P58304 MAPK10-263ENST00000641052 4307 ntBASIC4.68□□□□□ -1.66
VSX2P58304 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VSX2P58304 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VSX2P58304 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VSX2P58304 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
VSX2P58304 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms