Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC009039.2-201ENST00000624524 529 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC104454.1-201ENST00000421341 1401 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 AF287957.1-201ENST00000607368 1595 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC119744.1-201ENST00000454746 1715 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AL355852.1-201ENST00000454081 1771 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SUMO3P55854 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 PDZK1P1-202ENST00000425209 1350 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 RNU6-560P-201ENST00000364007 108 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 SUGT1P2-201ENST00000379452 992 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 Y_RNA.465-201ENST00000384293 102 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 RPL11P3-201ENST00000395256 523 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 RPL24P2-201ENST00000421023 475 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 KRT8P51-201ENST00000438938 274 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 HMGB1P16-201ENST00000447155 540 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.35□□□□□ -1.55
SUMO3P55854 MYO5BP2-201ENST00000449815 1277 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 AC079776.3-201ENST00000450665 370 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 AC234781.3-201ENST00000452540 973 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 NECAP1P2-201ENST00000455668 727 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 NDUFA5P9-201ENST00000472609 340 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 AC128716.1-201ENST00000475129 166 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 RN7SL193P-201ENST00000491708 276 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 RPS27AP18-201ENST00000515536 459 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 MIR2117-201ENST00000516780 80 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.35□□□□□ -1.55
SUMO3P55854 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 PCNAP4-201ENST00000532690 730 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.35□□□□□ -1.55
SUMO3P55854 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.35□□□□□ -1.55
SUMO3P55854 NPM1P42-201ENST00000560329 862 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.35□□□□□ -1.55
SUMO3P55854 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.35□□□□□ -1.55
SUMO3P55854 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.35□□□□□ -1.55
SUMO3P55854 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 AP001267.4-201ENST00000602598 545 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 NANOGP3-201ENST00000605855 286 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC107075.1-201ENST00000613695 314 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 AC078883.4-201ENST00000623218 367 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 PARP4P2-201ENST00000446672 3326 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC022031.1-201ENST00000585985 2593 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 TTC41P-205ENST00000551270 3963 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SUMO3P55854 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SUMO3P55854 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.35□□□□□ -1.55
SUMO3P55854 AC009313.2-201ENST00000417893 1941 ntBASIC5.35□□□□□ -1.55
SUMO3P55854 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SUMO3P55854 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.34□□□□□ -1.55
SUMO3P55854 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.34□□□□□ -1.55
SUMO3P55854 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SUMO3P55854 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.34□□□□□ -1.55
SUMO3P55854 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 AL158152.1-201ENST00000602652 1435 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms