Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP98P52948 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP98P52948 RN7SKP263-201ENST00000411194 309 ntBASIC5.77□□□□□ -1.49
NUP98P52948 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP98P52948 CYCSP34-201ENST00000458172 304 ntBASIC5.77□□□□□ -1.49
NUP98P52948 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP98P52948 AC093824.1-201ENST00000508796 343 ntBASIC5.77□□□□□ -1.49
NUP98P52948 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP98P52948 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP98P52948 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
NUP98P52948 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NUP98P52948 AC023575.1-201ENST00000580510 358 ntBASIC5.77□□□□□ -1.49
NUP98P52948 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP98P52948 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.77□□□□□ -1.49
NUP98P52948 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP98P52948 AC015914.2-201ENST00000618167 288 ntBASIC5.77□□□□□ -1.49
NUP98P52948 FRG1EP-201ENST00000634469 770 ntBASIC5.77□□□□□ -1.49
NUP98P52948 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP98P52948 OR2L1P-202ENST00000641567 1023 ntBASIC5.77□□□□□ -1.49
NUP98P52948 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP98P52948 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP98P52948 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP98P52948 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NUP98P52948 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NUP98P52948 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP98P52948 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP98P52948 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP98P52948 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP98P52948 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP98P52948 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP98P52948 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP98P52948 AC108475.1-201ENST00000507880 950 ntBASIC5.76□□□□□ -1.49
NUP98P52948 PGBD4P4-201ENST00000509673 613 ntBASIC5.76□□□□□ -1.49
NUP98P52948 FKBP1BP1-201ENST00000553366 325 ntBASIC5.76□□□□□ -1.49
NUP98P52948 VN1R85P-201ENST00000601587 426 ntBASIC5.76□□□□□ -1.49
NUP98P52948 OR8G7P-201ENST00000616658 848 ntBASIC5.76□□□□□ -1.49
NUP98P52948 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP98P52948 AL592182.3-201ENST00000642132 3304 ntBASIC5.76□□□□□ -1.49
NUP98P52948 UGT2B26P-201ENST00000508672 1613 ntBASIC5.76□□□□□ -1.49
NUP98P52948 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP98P52948 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NUP98P52948 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP98P52948 RN7SL98P-201ENST00000462271 300 ntBASIC5.76□□□□□ -1.49
NUP98P52948 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP98P52948 MRPL49P2-201ENST00000521066 465 ntBASIC5.76□□□□□ -1.49
NUP98P52948 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP98P52948 AC074050.1-201ENST00000563247 211 ntBASIC5.76□□□□□ -1.49
NUP98P52948 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP98P52948 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.75□□□□□ -1.49
NUP98P52948 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP98P52948 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 MIR383-201ENST00000362257 73 ntBASIC5.75□□□□□ -1.49
NUP98P52948 SNORA5.1-201ENST00000384275 131 ntBASIC5.75□□□□□ -1.49
NUP98P52948 AL590762.2-201ENST00000395798 571 ntBASIC5.75□□□□□ -1.49
NUP98P52948 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP98P52948 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 Z74021.1-201ENST00000423610 407 ntBASIC5.75□□□□□ -1.49
NUP98P52948 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP98P52948 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.75□□□□□ -1.49
NUP98P52948 AC114755.5-201ENST00000447760 831 ntBASIC5.75□□□□□ -1.49
NUP98P52948 AC010618.1-201ENST00000469924 477 ntBASIC5.75□□□□□ -1.49
NUP98P52948 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP98P52948 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.75□□□□□ -1.49
NUP98P52948 SNORA70.11-201ENST00000515987 138 ntBASIC5.75□□□□□ -1.49
NUP98P52948 SNORA70.13-201ENST00000516116 138 ntBASIC5.75□□□□□ -1.49
NUP98P52948 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP98P52948 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP98P52948 AC073137.1-201ENST00000605636 634 ntBASIC5.75□□□□□ -1.49
NUP98P52948 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.75□□□□□ -1.49
NUP98P52948 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NUP98P52948 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NUP98P52948 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP98P52948 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUP98P52948 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NUP98P52948 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP98P52948 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP98P52948 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NUP98P52948 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP98P52948 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP98P52948 MIR1193-201ENST00000408109 78 ntBASIC5.74□□□□□ -1.49
NUP98P52948 NRBF2P2-201ENST00000413087 861 ntBASIC5.74□□□□□ -1.49
NUP98P52948 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP98P52948 GAPDHP49-201ENST00000421421 961 ntBASIC5.74□□□□□ -1.49
NUP98P52948 RPL23AP43-201ENST00000446445 471 ntBASIC5.74□□□□□ -1.49
NUP98P52948 H2AFZP5-201ENST00000446960 382 ntBASIC5.74□□□□□ -1.49
NUP98P52948 RHEBP2-201ENST00000450289 600 ntBASIC5.74□□□□□ -1.49
NUP98P52948 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.74□□□□□ -1.49
NUP98P52948 AC106806.2-201ENST00000509365 500 ntBASIC5.74□□□□□ -1.49
NUP98P52948 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP98P52948 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP98P52948 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms