Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC019193.2-201ENST00000610012 634 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 AC022306.3-201ENST00000619930 550 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.38□□□□□ -1.39
COL15A1P39059 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL15A1P39059 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL15A1P39059 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.38□□□□□ -1.39
COL15A1P39059 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.38□□□□□ -1.39
COL15A1P39059 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.38□□□□□ -1.39
COL15A1P39059 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.38□□□□□ -1.39
COL15A1P39059 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
COL15A1P39059 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL15A1P39059 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.37□□□□□ -1.39
COL15A1P39059 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.37□□□□□ -1.39
COL15A1P39059 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.37□□□□□ -1.39
COL15A1P39059 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL15A1P39059 Z98755.1-201ENST00000407015 1384 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL15A1P39059 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
COL15A1P39059 RPL32P3-201ENST00000359025 275 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 ATP5HP3-201ENST00000396994 486 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 AC068287.1-201ENST00000430283 295 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.37□□□□□ -1.39
COL15A1P39059 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.37□□□□□ -1.39
COL15A1P39059 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.37□□□□□ -1.39
COL15A1P39059 OR1H1P-201ENST00000448731 937 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 MTND6P32-201ENST00000457611 483 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 AC091153.1-201ENST00000466297 402 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL15A1P39059 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
COL15A1P39059 AC097486.1-201ENST00000515331 210 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 KCTD9P6-201ENST00000522306 950 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.37□□□□□ -1.39
COL15A1P39059 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL15A1P39059 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.37□□□□□ -1.39
COL15A1P39059 AC242628.1-201ENST00000606810 391 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 AC110792.4-201ENST00000609843 298 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL15A1P39059 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL15A1P39059 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.37□□□□□ -1.39
COL15A1P39059 AL132640.2-201ENST00000559968 1698 ntBASIC6.37□□□□□ -1.39
COL15A1P39059 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL15A1P39059 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL15A1P39059 AC010928.1-201ENST00000592477 1447 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
COL15A1P39059 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL15A1P39059 CCNB2P1-201ENST00000399411 1150 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 AL355143.1-201ENST00000407101 841 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 AL354692.1-201ENST00000423044 315 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.36□□□□□ -1.39
COL15A1P39059 PRPF38AP1-201ENST00000451976 933 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.36□□□□□ -1.39
COL15A1P39059 AC111000.3-201ENST00000508057 576 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.36□□□□□ -1.39
COL15A1P39059 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
COL15A1P39059 AC074029.2-201ENST00000551045 634 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.36□□□□□ -1.39
COL15A1P39059 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL15A1P39059 AC011453.2-201ENST00000603737 729 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.36□□□□□ -1.39
COL15A1P39059 AL391834.1-201ENST00000609609 560 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 AC074276.2-201ENST00000619891 348 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 AC091932.2-201ENST00000623014 291 ntBASIC6.36□□□□□ -1.39
COL15A1P39059 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL15A1P39059 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.36□□□□□ -1.39
COL15A1P39059 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL15A1P39059 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
COL15A1P39059 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL15A1P39059 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
COL15A1P39059 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.36□□□□□ -1.39
COL15A1P39059 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL15A1P39059 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL15A1P39059 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL15A1P39059 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.35□□□□□ -1.39
COL15A1P39059 RNA5SP223-201ENST00000365174 120 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL15A1P39059 BX510359.2-201ENST00000417920 305 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 AL354766.1-201ENST00000423396 542 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 RNF2P1-201ENST00000442955 1010 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 AC012512.1-201ENST00000446594 718 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 SLC25A18P1-201ENST00000449385 454 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 AC010733.1-201ENST00000451515 401 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.35□□□□□ -1.39
COL15A1P39059 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.35□□□□□ -1.39
COL15A1P39059 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.35□□□□□ -1.39
COL15A1P39059 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.35□□□□□ -1.39
COL15A1P39059 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.35□□□□□ -1.39
COL15A1P39059 AC027338.1-201ENST00000514840 825 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.35□□□□□ -1.39
COL15A1P39059 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.35□□□□□ -1.39
COL15A1P39059 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.35□□□□□ -1.39
COL15A1P39059 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.35□□□□□ -1.39
COL15A1P39059 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms