Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AL138787.1-202ENST00000437804 898 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 NPM1P33-201ENST00000438918 872 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 ARL5AP3-201ENST00000439327 386 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 RAB28P3-201ENST00000448325 597 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 RPL31P20-201ENST00000449593 360 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.09□□□□□ -1.43
TM4SF1P30408 AC025181.1-201ENST00000477507 416 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.09□□□□□ -1.43
TM4SF1P30408 SNORA70.11-201ENST00000515987 138 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 SNORA70.13-201ENST00000516116 138 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 SNRPGP1-201ENST00000553864 222 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.09□□□□□ -1.43
TM4SF1P30408 AC084783.1-201ENST00000565846 910 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.09□□□□□ -1.43
TM4SF1P30408 RN7SL802P-201ENST00000577858 299 ntBASIC6.09□□□□□ -1.43
TM4SF1P30408 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.09□□□□□ -1.43
TM4SF1P30408 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.09□□□□□ -1.43
TM4SF1P30408 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.09□□□□□ -1.43
TM4SF1P30408 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF1P30408 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.09□□□□□ -1.43
TM4SF1P30408 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF1P30408 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF1P30408 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.09□□□□□ -1.44
TM4SF1P30408 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.09□□□□□ -1.44
TM4SF1P30408 AC068446.1-201ENST00000556425 1549 ntBASIC6.09□□□□□ -1.44
TM4SF1P30408 AC011503.2-201ENST00000594230 1500 ntBASIC6.09□□□□□ -1.44
TM4SF1P30408 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.09□□□□□ -1.44
TM4SF1P30408 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TM4SF1P30408 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.08□□□□□ -1.44
TM4SF1P30408 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 OR51C1P-202ENST00000641159 1444 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TM4SF1P30408 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.08□□□□□ -1.44
TM4SF1P30408 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TM4SF1P30408 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TM4SF1P30408 AL589655.1-201ENST00000405398 482 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 U3.32-201ENST00000408116 212 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 AL691482.1-201ENST00000453255 87 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.08□□□□□ -1.44
TM4SF1P30408 AC011276.1-201ENST00000469688 323 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.08□□□□□ -1.44
TM4SF1P30408 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.08□□□□□ -1.44
TM4SF1P30408 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.08□□□□□ -1.44
TM4SF1P30408 AC084824.1-201ENST00000550917 1005 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 AC021483.2-201ENST00000567415 758 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.08□□□□□ -1.44
TM4SF1P30408 MIR5699-201ENST00000578903 90 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.08□□□□□ -1.44
TM4SF1P30408 KATNBL1P1-201ENST00000605192 748 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.08□□□□□ -1.44
TM4SF1P30408 AC100847.1-201ENST00000611316 481 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 AC007786.3-201ENST00000615154 596 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 AC005899.7-201ENST00000618199 588 ntBASIC6.08□□□□□ -1.44
TM4SF1P30408 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.08□□□□□ -1.44
TM4SF1P30408 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM4SF1P30408 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF1P30408 AL355834.1-201ENST00000556602 3965 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AC009951.1-201ENST00000623674 2614 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.07□□□□□ -1.44
TM4SF1P30408 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.07□□□□□ -1.44
TM4SF1P30408 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF1P30408 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM4SF1P30408 MT-RNR1-201ENST00000389680 954 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 RNA5SP241-201ENST00000391326 114 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 MTND4LP17-201ENST00000414607 293 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AL512504.1-201ENST00000415494 778 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.07□□□□□ -1.44
TM4SF1P30408 RPS27AP6-201ENST00000427962 448 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 GAPDHP14-201ENST00000450472 937 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AK4P6-201ENST00000505168 528 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.07□□□□□ -1.44
TM4SF1P30408 SLC25A15P5-201ENST00000508033 253 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AC026402.1-201ENST00000513642 170 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AC104997.1-201ENST00000519761 717 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AC087272.1-201ENST00000523624 533 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.07□□□□□ -1.44
TM4SF1P30408 AP001804.2-201ENST00000533932 910 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AC133555.2-201ENST00000550213 292 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.07□□□□□ -1.44
TM4SF1P30408 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.07□□□□□ -1.44
TM4SF1P30408 AL162574.1-201ENST00000615702 950 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 AC019206.1-201ENST00000621938 425 ntBASIC6.07□□□□□ -1.44
TM4SF1P30408 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TM4SF1P30408 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TM4SF1P30408 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TM4SF1P30408 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
TM4SF1P30408 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms