Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 FP325313.1-201ENST00000638228 703 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC3P19447 CR381670.1-201ENST00000624291 1693 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 AC091305.2-201ENST00000624049 1576 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC3P19447 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC3P19447 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
ERCC3P19447 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC3P19447 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC3P19447 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC3P19447 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
ERCC3P19447 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC3P19447 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ERCC3P19447 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC3P19447 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC3P19447 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC3P19447 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC3P19447 AC008549.2-201ENST00000333482 706 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 RNU5D-1-201ENST00000363299 116 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 RNU6-839P-201ENST00000363347 108 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 RNU6-1066P-201ENST00000363573 105 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 Y_RNA.311-201ENST00000365068 96 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 RN7SKP69-201ENST00000365390 305 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AL031985.1-201ENST00000392713 418 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AL133264.1-201ENST00000407157 562 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 RN7SKP206-201ENST00000410823 293 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 RNU6-272P-201ENST00000411028 104 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AC019050.1-201ENST00000418508 492 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC3P19447 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC3P19447 AC129850.1-201ENST00000436203 508 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC3P19447 H3F3BP1-201ENST00000440551 403 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 REG1CP-206ENST00000447469 496 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AL034418.1-201ENST00000448675 860 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC3P19447 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC3P19447 RN7SL101P-201ENST00000496350 279 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC3P19447 DSTNP2-201ENST00000504533 515 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 SNORA58-201ENST00000505219 137 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.24□□□□□ -1.25
ERCC3P19447 AC008885.2-201ENST00000509506 930 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 RNU6-678P-201ENST00000516832 109 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC3P19447 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC3P19447 OR5AZ1P-201ENST00000527448 943 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 VN1R90P-201ENST00000595717 726 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC3P19447 AC068768.2-201ENST00000602352 343 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AF131215.7-201ENST00000602443 707 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AC068790.2-201ENST00000602601 557 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AP001823.1-201ENST00000604056 1003 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AP000894.4-201ENST00000610185 483 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AC008121.2-201ENST00000614647 523 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 RFPL4AP6-201ENST00000616792 846 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AC026585.1-201ENST00000619582 524 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 AC091965.5-201ENST00000624785 342 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 SAMMSON-209ENST00000641222 1100 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ERCC3P19447 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
ERCC3P19447 AL161912.4-201ENST00000623889 2468 ntBASIC7.24□□□□□ -1.25
ERCC3P19447 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ERCC3P19447 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC3P19447 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.24□□□□□ -1.25
ERCC3P19447 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC3P19447 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC3P19447 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
ERCC3P19447 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC3P19447 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC3P19447 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
ERCC3P19447 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC3P19447 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC3P19447 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
ERCC3P19447 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC3P19447 AL121768.1-201ENST00000613917 2544 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 RNU6-623P-201ENST00000363143 105 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 RNU4-24P-201ENST00000364565 139 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 Y_RNA.408-201ENST00000383987 102 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
ERCC3P19447 AL512422.1-201ENST00000407033 553 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.23□□□□□ -1.25
ERCC3P19447 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC3P19447 AC130360.1-201ENST00000425489 1117 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC3P19447 DYNLL1P7-201ENST00000429273 258 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 AC010153.1-201ENST00000432862 727 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 AC096638.2-201ENST00000434965 711 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 AL606662.1-201ENST00000445763 553 ntBASIC7.23□□□□□ -1.25
ERCC3P19447 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC3P19447 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC3P19447 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms