Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.62□□□□□ -1.51
MMP3P08254 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.62□□□□□ -1.51
MMP3P08254 AC073264.2-201ENST00000448886 166 ntBASIC5.62□□□□□ -1.51
MMP3P08254 RBMY2TP-201ENST00000451162 947 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.62□□□□□ -1.51
MMP3P08254 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.62□□□□□ -1.51
MMP3P08254 AC108157.1-201ENST00000510511 539 ntBASIC5.62□□□□□ -1.51
MMP3P08254 HMGB1P47-201ENST00000511281 589 ntBASIC5.62□□□□□ -1.51
MMP3P08254 RNU6-1102P-201ENST00000516149 96 ntBASIC5.62□□□□□ -1.51
MMP3P08254 RNU6-889P-201ENST00000517189 103 ntBASIC5.62□□□□□ -1.51
MMP3P08254 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.62□□□□□ -1.51
MMP3P08254 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.62□□□□□ -1.51
MMP3P08254 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.62□□□□□ -1.51
MMP3P08254 MIR4697-201ENST00000582977 78 ntBASIC5.62□□□□□ -1.51
MMP3P08254 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 AL133247.2-201ENST00000603236 482 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AC008745.1-201ENST00000604064 271 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AL391358.1-201ENST00000605342 190 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AC026979.4-201ENST00000606555 645 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AP001521.2-201ENST00000608772 546 ntBASIC5.62□□□□□ -1.51
MMP3P08254 MIR6780A-201ENST00000615089 68 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AL163051.2-201ENST00000618976 735 ntBASIC5.62□□□□□ -1.51
MMP3P08254 MTND4P9-201ENST00000507819 1346 ntBASIC5.62□□□□□ -1.51
MMP3P08254 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 AC009501.3-201ENST00000605001 1352 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MMP3P08254 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
MMP3P08254 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
MMP3P08254 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 RNU6-925P-201ENST00000384629 104 ntBASIC5.61□□□□□ -1.51
MMP3P08254 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 AL390316.1-201ENST00000406279 553 ntBASIC5.61□□□□□ -1.51
MMP3P08254 NPM1P40-201ENST00000412758 733 ntBASIC5.61□□□□□ -1.51
MMP3P08254 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.61□□□□□ -1.51
MMP3P08254 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.61□□□□□ -1.51
MMP3P08254 RPS29P9-201ENST00000440360 171 ntBASIC5.61□□□□□ -1.51
MMP3P08254 RPL31P20-201ENST00000449593 360 ntBASIC5.61□□□□□ -1.51
MMP3P08254 RN7SL459P-201ENST00000481078 302 ntBASIC5.61□□□□□ -1.51
MMP3P08254 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.61□□□□□ -1.51
MMP3P08254 FABP5P6-201ENST00000510588 409 ntBASIC5.61□□□□□ -1.51
MMP3P08254 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
MMP3P08254 AC026782.2-201ENST00000510845 636 ntBASIC5.61□□□□□ -1.51
MMP3P08254 ICE2P1-201ENST00000512800 1849 ntBASIC5.61□□□□□ -1.51
MMP3P08254 VTA1P2-201ENST00000520205 911 ntBASIC5.61□□□□□ -1.51
MMP3P08254 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.61□□□□□ -1.51
MMP3P08254 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.61□□□□□ -1.51
MMP3P08254 MORF4L1P3-201ENST00000525966 950 ntBASIC5.61□□□□□ -1.51
MMP3P08254 OR5AN2P-201ENST00000534535 896 ntBASIC5.61□□□□□ -1.51
MMP3P08254 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.61□□□□□ -1.51
MMP3P08254 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 AC104072.1-201ENST00000568817 668 ntBASIC5.61□□□□□ -1.51
MMP3P08254 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
MMP3P08254 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 BNIP3P40-201ENST00000596017 556 ntBASIC5.61□□□□□ -1.51
MMP3P08254 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.61□□□□□ -1.51
MMP3P08254 AC120053.1-201ENST00000607706 736 ntBASIC5.61□□□□□ -1.51
MMP3P08254 AC007786.3-201ENST00000615154 596 ntBASIC5.61□□□□□ -1.51
MMP3P08254 AC016957.2-201ENST00000616998 848 ntBASIC5.61□□□□□ -1.51
MMP3P08254 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 SAMMSON-226ENST00000642089 1582 ntBASIC5.61□□□□□ -1.51
MMP3P08254 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MMP3P08254 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.61□□□□□ -1.51
MMP3P08254 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.61□□□□□ -1.51
MMP3P08254 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
MMP3P08254 AP001284.1-201ENST00000528393 2118 ntBASIC5.6□□□□□ -1.51
MMP3P08254 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.6□□□□□ -1.51
MMP3P08254 AC099654.2-201ENST00000433031 1980 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms