Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 RNA5SP146-201ENST00000410743 123 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC004448.2-201ENST00000422360 586 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 MTCO3P17-201ENST00000443775 513 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AL163193.1-201ENST00000444895 788 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC073587.1-201ENST00000447093 876 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 MTND6P5-201ENST00000448266 512 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AP002371.1-201ENST00000463604 433 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 RN7SL41P-201ENST00000476144 297 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC090114.3-201ENST00000479267 829 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 RPL23AP37-201ENST00000479658 549 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 RPS4XP14-201ENST00000493072 781 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 RPS4XP18-201ENST00000495480 763 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC010350.1-201ENST00000504908 231 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC006499.3-201ENST00000506077 748 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC022832.1-201ENST00000530718 645 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AL390334.1-201ENST00000556395 450 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 AC015804.1-201ENST00000622935 435 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 EOGT-210ENST00000615922 1931 ntBASIC4.34□□□□□ -1.71
HLA-DPB1P04440 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HLA-DPB1P04440 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DPB1P04440 AL672167.1-203ENST00000641299 2975 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 ECM1P2-201ENST00000503354 1577 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 U8.4-201ENST00000363626 134 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 RNA5SP455-201ENST00000365190 119 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 RNU1-106P-201ENST00000384382 164 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 HDGFP1-201ENST00000405943 252 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 TDGF1P1-201ENST00000445734 527 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AL354714.3-201ENST00000447284 493 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC104849.1-201ENST00000462623 405 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 RPL23AP65-201ENST00000475608 468 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 BX284632.1-201ENST00000478218 541 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 HMGN2P25-201ENST00000486956 268 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC134698.5-201ENST00000519444 336 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC026688.1-201ENST00000520639 1168 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 CYCSP28-201ENST00000534284 321 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 AL121612.2-201ENST00000612261 482 ntBASIC4.33□□□□□ -1.72
HLA-DPB1P04440 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPB1P04440 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 AL445487.1-201ENST00000415694 1580 ntBASIC4.32□□□□□ -1.72
HLA-DPB1P04440 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DPB1P04440 SNURFL-201ENST00000309296 343 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms