Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU6-386P-201ENST00000362650 107 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 RN7SKP113-201ENST00000363891 295 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC240504.1-201ENST00000395709 845 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 MIR921-201ENST00000401133 56 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AL133173.1-201ENST00000423458 397 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 HMGB1P32-201ENST00000425971 565 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AL662874.1-201ENST00000426065 230 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 RPS29P14-201ENST00000431518 171 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 FMO7P-201ENST00000436045 768 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC005297.1-201ENST00000444765 862 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 RPS27AP18-201ENST00000515536 459 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 RNA5SP154-201ENST00000516193 111 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC022826.1-201ENST00000519383 805 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 NANOGNBP2-201ENST00000544753 553 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AL049874.4-201ENST00000557593 255 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC010547.6-201ENST00000571789 193 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AL133406.3-201ENST00000606817 541 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AL158196.1-201ENST00000616786 434 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 MIR7154-201ENST00000620673 73 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AP001005.3-201ENST00000622049 129 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC006840.1-201ENST00000623069 542 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.71□□□□□ -1.82
HLA-DQA1P01909 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC009643.2-201ENST00000603543 1448 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RNA5SP46-201ENST00000362370 120 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RNA5SP90-201ENST00000364801 99 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RNU4-2-201ENST00000365668 141 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RNA5SP122-201ENST00000384457 108 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 MIR105-1-201ENST00000385222 81 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RNA5SP178-201ENST00000410380 128 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RNA5SP104-201ENST00000410989 118 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RN7SKP216-201ENST00000411050 312 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 OR6E1P-201ENST00000414424 923 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AL138787.1-202ENST00000437804 898 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AC004938.1-201ENST00000438468 308 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RPS29P10-201ENST00000439197 166 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AC073109.1-201ENST00000445066 978 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AL691482.1-201ENST00000453255 87 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 C1DP3-201ENST00000455013 423 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 HMGN1P8-201ENST00000463578 288 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 RN7SL51P-201ENST00000468230 285 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AC022336.1-201ENST00000475510 337 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AC012158.1-204ENST00000483430 465 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 MTND3P6-201ENST00000485242 339 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 AL136038.1-201ENST00000497246 351 ntBASIC3.7□□□□□ -1.82
HLA-DQA1P01909 PSMA2P2-201ENST00000504319 686 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms