Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC073869.8-201ENST00000641806 335 ntBASIC5.13□□□□□ -1.59
LDLRP01130 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.13□□□□□ -1.59
LDLRP01130 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LDLRP01130 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LDLRP01130 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LDLRP01130 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LDLRP01130 AL450345.1-202ENST00000605741 3881 ntBASIC5.12□□□□□ -1.59
LDLRP01130 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.12□□□□□ -1.59
LDLRP01130 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LDLRP01130 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 RNA5SP131-201ENST00000365452 119 ntBASIC5.12□□□□□ -1.59
LDLRP01130 RNA5SP30-201ENST00000365552 115 ntBASIC5.12□□□□□ -1.59
LDLRP01130 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.12□□□□□ -1.59
LDLRP01130 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 SNORD65-201ENST00000391079 73 ntBASIC5.12□□□□□ -1.59
LDLRP01130 NPM1P40-201ENST00000412758 733 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.12□□□□□ -1.59
LDLRP01130 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.12□□□□□ -1.59
LDLRP01130 RPS26P4-201ENST00000431743 355 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 OR52B5P-201ENST00000435337 951 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AC245047.2-201ENST00000441060 530 ntBASIC5.12□□□□□ -1.59
LDLRP01130 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.12□□□□□ -1.59
LDLRP01130 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.12□□□□□ -1.59
LDLRP01130 RN7SL51P-201ENST00000468230 285 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AC108729.2-201ENST00000476543 840 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AC087672.1-201ENST00000479876 766 ntBASIC5.12□□□□□ -1.59
LDLRP01130 CEACAMP10-202ENST00000495431 496 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.12□□□□□ -1.59
LDLRP01130 AC090638.1-201ENST00000498296 909 ntBASIC5.12□□□□□ -1.59
LDLRP01130 RPS27AP18-201ENST00000515536 459 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AC016550.3-201ENST00000515706 767 ntBASIC5.12□□□□□ -1.59
LDLRP01130 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.12□□□□□ -1.59
LDLRP01130 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.12□□□□□ -1.59
LDLRP01130 CR383656.14-201ENST00000551951 406 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AC018552.1-201ENST00000562099 811 ntBASIC5.12□□□□□ -1.59
LDLRP01130 MIR3691-201ENST00000578066 90 ntBASIC5.12□□□□□ -1.59
LDLRP01130 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.12□□□□□ -1.59
LDLRP01130 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.12□□□□□ -1.59
LDLRP01130 AC004223.2-201ENST00000590309 544 ntBASIC5.12□□□□□ -1.59
LDLRP01130 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AL731566.2-201ENST00000618971 317 ntBASIC5.12□□□□□ -1.59
LDLRP01130 AC019080.5-201ENST00000624891 757 ntBASIC5.12□□□□□ -1.59
LDLRP01130 OR52B5P-202ENST00000641118 1110 ntBASIC5.12□□□□□ -1.59
LDLRP01130 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 AC027228.2-201ENST00000567141 2154 ntBASIC5.12□□□□□ -1.59
LDLRP01130 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDLRP01130 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.12□□□□□ -1.59
LDLRP01130 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
LDLRP01130 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDLRP01130 RPL23P2-201ENST00000320371 421 ntBASIC5.11□□□□□ -1.59
LDLRP01130 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LDLRP01130 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.11□□□□□ -1.59
LDLRP01130 RNU6-729P-201ENST00000384399 107 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RNU6-1320P-201ENST00000390838 107 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RNU6-1176P-201ENST00000390955 107 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RNU6-1269P-201ENST00000391139 107 ntBASIC5.11□□□□□ -1.59
LDLRP01130 PTGES3P2-201ENST00000407942 482 ntBASIC5.11□□□□□ -1.59
LDLRP01130 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.11□□□□□ -1.59
LDLRP01130 NENFP1-201ENST00000419476 466 ntBASIC5.11□□□□□ -1.59
LDLRP01130 AC007161.1-204ENST00000423039 460 ntBASIC5.11□□□□□ -1.59
LDLRP01130 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.11□□□□□ -1.59
LDLRP01130 UBE2V1P6-201ENST00000430840 422 ntBASIC5.11□□□□□ -1.59
LDLRP01130 ZNF965P-201ENST00000432501 817 ntBASIC5.11□□□□□ -1.59
LDLRP01130 HSFY7P-201ENST00000432672 318 ntBASIC5.11□□□□□ -1.59
LDLRP01130 AL606490.7-201ENST00000433136 191 ntBASIC5.11□□□□□ -1.59
LDLRP01130 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.11□□□□□ -1.59
LDLRP01130 HSFY8P-201ENST00000437934 318 ntBASIC5.11□□□□□ -1.59
LDLRP01130 CYCSP24-201ENST00000445119 316 ntBASIC5.11□□□□□ -1.59
LDLRP01130 Z80107.2-201ENST00000445127 392 ntBASIC5.11□□□□□ -1.59
LDLRP01130 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.11□□□□□ -1.59
LDLRP01130 HSFY5P-201ENST00000453726 309 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms