Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
UPK1BO75841 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1BO75841 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UPK1BO75841 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
UPK1BO75841 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 RNU1-15P-201ENST00000353977 144 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 MIR375-201ENST00000362103 64 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 RNA5SP477-201ENST00000362639 119 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 AC104297.1-201ENST00000393779 870 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 JKAMPP1-201ENST00000413804 919 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1BO75841 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.11□□□□□ -1.75
UPK1BO75841 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1BO75841 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 LINC00328-2P-201ENST00000436585 219 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 SCARNA21.2-201ENST00000516600 166 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1BO75841 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1BO75841 AC107016.1-201ENST00000550463 337 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 RPL10P14-201ENST00000565265 298 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 AC091178.1-203ENST00000584586 279 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1BO75841 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UPK1BO75841 MIR6070-201ENST00000613967 103 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 AC019206.1-201ENST00000621938 425 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 AL359715.5-201ENST00000623431 443 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 AC087821.1-201ENST00000623639 567 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.11□□□□□ -1.75
UPK1BO75841 AC235565.1-201ENST00000456962 1325 ntBASIC4.11□□□□□ -1.75
UPK1BO75841 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.11□□□□□ -1.75
UPK1BO75841 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
UPK1BO75841 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 DLD-205ENST00000440410 1993 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1BO75841 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1BO75841 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
UPK1BO75841 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
UPK1BO75841 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
UPK1BO75841 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.1□□□□□ -1.75
UPK1BO75841 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.1□□□□□ -1.75
UPK1BO75841 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 AL031985.3-201ENST00000565390 2449 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 RNU6-697P-201ENST00000363348 107 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 RN7SKP224-201ENST00000364140 325 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
UPK1BO75841 RNU1-44P-201ENST00000384453 163 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 AL357515.1-201ENST00000402967 542 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 ZNF603P-201ENST00000405613 487 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1BO75841 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 HMGB3P10-201ENST00000434734 572 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 RPEP4-201ENST00000437636 602 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 AL354714.3-201ENST00000447284 493 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 AC000111.2-201ENST00000448200 210 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 NPM1P39-201ENST00000449818 867 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 OR6C72P-201ENST00000451403 892 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 AC073476.1-201ENST00000452854 407 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 TREML3P-201ENST00000457327 501 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC010350.1-201ENST00000504908 231 ntBASIC4.1□□□□□ -1.75
UPK1BO75841 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1BO75841 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.1□□□□□ -1.75
UPK1BO75841 NPM1P52-201ENST00000518264 846 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms