Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.05□□□□□ -2.08
USH2AO75445 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.05□□□□□ -2.08
USH2AO75445 NOTCH2P1-201ENST00000443481 624 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AC090804.1-201ENST00000448870 490 ntBASIC2.05□□□□□ -2.08
USH2AO75445 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 AC104763.2-201ENST00000604179 382 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AC091979.2-201ENST00000607514 214 ntBASIC2.05□□□□□ -2.08
USH2AO75445 PCA3_2.1-201ENST00000612507 409 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AL022401.1-201ENST00000619498 108 ntBASIC2.05□□□□□ -2.08
USH2AO75445 MIR6839-201ENST00000620425 113 ntBASIC2.05□□□□□ -2.08
USH2AO75445 RNF123-214ENST00000629802 207 ntTSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USH2AO75445 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 SNORA71.2-201ENST00000364941 134 ntBASIC2.04□□□□□ -2.08
USH2AO75445 OR1F12-201ENST00000402365 945 ntBASIC2.04□□□□□ -2.08
USH2AO75445 RNA5SP345-201ENST00000410646 108 ntBASIC2.04□□□□□ -2.08
USH2AO75445 AL391219.1-201ENST00000422570 483 ntBASIC2.04□□□□□ -2.08
USH2AO75445 RPL7P2-201ENST00000427639 268 ntBASIC2.04□□□□□ -2.08
USH2AO75445 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 AL162151.2-201ENST00000448875 158 ntBASIC2.04□□□□□ -2.08
USH2AO75445 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.04□□□□□ -2.08
USH2AO75445 HSPD1P15-201ENST00000505573 1122 ntBASIC2.04□□□□□ -2.08
USH2AO75445 MIR5699-201ENST00000578903 90 ntBASIC2.04□□□□□ -2.08
USH2AO75445 MTCO3P22-201ENST00000603219 784 ntBASIC2.04□□□□□ -2.08
USH2AO75445 uc_338.13-201ENST00000618243 179 ntBASIC2.04□□□□□ -2.08
USH2AO75445 AP003497.2-201ENST00000624220 967 ntBASIC2.04□□□□□ -2.08
USH2AO75445 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
USH2AO75445 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
USH2AO75445 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.04□□□□□ -2.08
USH2AO75445 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC2.04□□□□□ -2.08
USH2AO75445 SEPT10P1-201ENST00000517342 1162 ntBASIC2.04□□□□□ -2.08
USH2AO75445 AC105233.3-201ENST00000531125 744 ntBASIC2.04□□□□□ -2.08
USH2AO75445 GTF2IP22-201ENST00000554443 182 ntBASIC2.04□□□□□ -2.08
USH2AO75445 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 AC037471.2-201ENST00000564941 598 ntBASIC2.04□□□□□ -2.08
USH2AO75445 MIR5685-201ENST00000579080 79 ntBASIC2.04□□□□□ -2.08
USH2AO75445 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
USH2AO75445 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 AC024560.2-201ENST00000507981 1497 ntBASIC2.04□□□□□ -2.08
USH2AO75445 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 AL583835.1-201ENST00000399570 407 ntBASIC2.04□□□□□ -2.08
USH2AO75445 RGS17P1-201ENST00000423358 553 ntBASIC2.04□□□□□ -2.08
USH2AO75445 NDUFB4P11-201ENST00000560510 395 ntBASIC2.04□□□□□ -2.08
USH2AO75445 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.04□□□□□ -2.08
USH2AO75445 AL352984.2-202ENST00000613699 155 ntBASIC2.04□□□□□ -2.08
USH2AO75445 AC007546.1-201ENST00000619452 559 ntBASIC2.04□□□□□ -2.08
USH2AO75445 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 AC119744.1-201ENST00000454746 1715 ntBASIC2.04□□□□□ -2.08
USH2AO75445 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC2.04□□□□□ -2.08
USH2AO75445 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 MON2-214ENST00000641654 10382 ntBASIC2.04□□□□□ -2.08
USH2AO75445 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms