Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 AC083837.1-201ENST00000565297 2994 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.85□□□□□ -1.63
ZIC3O60481 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 AC140134.1-201ENST00000511830 3544 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ZIC3O60481 AL132640.2-201ENST00000559968 1698 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ZIC3O60481 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.84□□□□□ -1.63
ZIC3O60481 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 OR9K1P-201ENST00000326513 941 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 U3.2-201ENST00000362981 210 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 SNORA67-201ENST00000384423 137 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 RNU1-149P-201ENST00000390870 161 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.84□□□□□ -1.63
ZIC3O60481 AC005522.1-201ENST00000395416 346 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AP000534.2-201ENST00000412729 568 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 AL354868.1-201ENST00000417077 482 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AC234781.4-201ENST00000419384 244 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AC000041.1-201ENST00000439655 175 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 MTND1P26-201ENST00000440488 538 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 MTCO1P53-201ENST00000441633 699 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 RPS11P7-201ENST00000442125 465 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 AL163193.1-201ENST00000444895 788 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 AL096803.2-201ENST00000450032 677 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.84□□□□□ -1.63
ZIC3O60481 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 AC098862.1-201ENST00000504991 413 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 AC093720.1-201ENST00000505681 714 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 CDC42P3-201ENST00000518493 633 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.84□□□□□ -1.63
ZIC3O60481 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.84□□□□□ -1.63
ZIC3O60481 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.84□□□□□ -1.63
ZIC3O60481 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.84□□□□□ -1.63
ZIC3O60481 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.84□□□□□ -1.63
ZIC3O60481 AC069307.1-201ENST00000602820 447 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AL160237.3-201ENST00000604114 1013 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AC079610.2-201ENST00000604818 690 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AC140725.3-201ENST00000616193 880 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 MIR6133-201ENST00000617057 108 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.84□□□□□ -1.63
ZIC3O60481 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.84□□□□□ -1.63
ZIC3O60481 AL356863.1-201ENST00000623378 1080 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.84□□□□□ -1.63
ZIC3O60481 AC132825.7-201ENST00000638744 335 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
ZIC3O60481 AL121839.2-201ENST00000565058 6943 ntBASIC4.84□□□□□ -1.63
ZIC3O60481 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZIC3O60481 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZIC3O60481 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
ZIC3O60481 AP001284.1-201ENST00000528393 2118 ntBASIC4.84□□□□□ -1.64
ZIC3O60481 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.84□□□□□ -1.64
ZIC3O60481 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.84□□□□□ -1.64
ZIC3O60481 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.83□□□□□ -1.64
ZIC3O60481 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ZIC3O60481 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.83□□□□□ -1.64
ZIC3O60481 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZIC3O60481 UGT2B26P-201ENST00000508672 1613 ntBASIC4.83□□□□□ -1.64
ZIC3O60481 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ZIC3O60481 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZIC3O60481 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZIC3O60481 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ZIC3O60481 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZIC3O60481 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ZIC3O60481 RNA5SP453-201ENST00000362503 119 ntBASIC4.83□□□□□ -1.64
ZIC3O60481 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZIC3O60481 HSPA8P15-201ENST00000401676 786 ntBASIC4.83□□□□□ -1.64
ZIC3O60481 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.83□□□□□ -1.64
ZIC3O60481 OR51A6P-201ENST00000418680 1004 ntBASIC4.83□□□□□ -1.64
ZIC3O60481 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZIC3O60481 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
ZIC3O60481 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.83□□□□□ -1.64
ZIC3O60481 AC108075.1-201ENST00000424692 529 ntBASIC4.83□□□□□ -1.64
ZIC3O60481 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.83□□□□□ -1.64
ZIC3O60481 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.83□□□□□ -1.64
ZIC3O60481 NANOGP4-201ENST00000427230 913 ntBASIC4.83□□□□□ -1.64
ZIC3O60481 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms