Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AL590410.1-201ENST00000617925 333 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AP002799.1-201ENST00000623552 423 ntBASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX9Q9Y5X1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AP001002.1-201ENST00000625148 1513 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNU4-4P-201ENST00000364588 130 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNU6-1320P-201ENST00000390838 107 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNU6-1269P-201ENST00000391139 107 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AC073464.3-201ENST00000422564 712 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNU6-599P-201ENST00000459383 107 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNU6-1193P-201ENST00000459461 107 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 EIF2S2P4-201ENST00000461070 984 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AC093270.2-201ENST00000486157 792 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RN7SKP260-201ENST00000516907 149 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RN7SKP147-201ENST00000517154 244 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 MTND5P21-201ENST00000531961 522 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNU6-368P-201ENST00000620928 107 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RNU6-538P-201ENST00000622329 107 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AP001002.2-201ENST00000625137 386 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 THAP12P4-201ENST00000528321 2266 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 CASC19-281ENST00000642118 1554 ntBASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX9Q9Y5X1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 RNA5SP455-201ENST00000365190 119 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 SETP15-201ENST00000412724 337 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC007394.1-201ENST00000421941 531 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 DDX39BP1-205ENST00000422507 192 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AL392003.1-201ENST00000434394 243 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 BX842559.2-201ENST00000451418 605 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC107015.1-201ENST00000466902 747 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC092905.1-201ENST00000467527 949 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 RN7SL329P-201ENST00000467740 299 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 HMGN2P25-201ENST00000486956 268 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC104629.1-201ENST00000494226 508 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 NDUFA5P12-201ENST00000503796 343 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms