Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC083875.1-201ENST00000419509 405 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AL137014.1-201ENST00000420490 1226 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 NRBF2P3-201ENST00000432731 865 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 MTCO3P45-201ENST00000443036 613 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 RPL36AP55-201ENST00000454114 305 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC103563.5-201ENST00000455643 364 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 SNORA81.1-201ENST00000458922 177 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 RPS4XP10-201ENST00000465034 731 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 RPL5P30-201ENST00000465511 891 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 EIF4EP3-201ENST00000498782 656 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 RPL7L1P4-201ENST00000513004 707 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 SNORA48.10-201ENST00000516965 160 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC022861.1-201ENST00000522981 663 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 GTF2IP11-201ENST00000526931 420 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AP002812.4-201ENST00000532139 286 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 OR5B10P-201ENST00000532869 642 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC068587.4-201ENST00000533893 186 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 POLR2KP1-201ENST00000553226 168 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AL078601.3-201ENST00000573303 535 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 BMS1P7-201ENST00000602440 1052 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC245389.1-201ENST00000605141 529 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AL355333.1-201ENST00000605632 279 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC090771.1-201ENST00000585803 1618 ntBASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TRIM35Q9UPQ4 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TRIM35Q9UPQ4 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TRIM35Q9UPQ4 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
TRIM35Q9UPQ4 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TRIM35Q9UPQ4 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC074375.1-201ENST00000372993 192 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 MIR525-201ENST00000384978 85 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL359634.1-202ENST00000404721 284 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC139712.2-201ENST00000424302 339 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 RPL34P6-201ENST00000432390 345 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL161722.2-201ENST00000434731 981 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 PA2G4P1-201ENST00000442248 1197 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 SCDP1-201ENST00000455244 1081 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC008571.1-201ENST00000467232 300 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC091982.1-202ENST00000473923 343 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 RPL23AP8-201ENST00000479812 475 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 NACAP6-201ENST00000509572 622 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AP001803.1-201ENST00000525668 147 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 BNIP3P6-201ENST00000549284 499 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 BNIP3P16-201ENST00000589779 534 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 AC009161.2-201ENST00000624626 138 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 OR7E25P-202ENST00000641088 5937 ntBASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC9.39□□□□□ -0.91
TRIM35Q9UPQ4 ARHGAP42P4-201ENST00000549782 2934 ntBASIC9.38□□□□□ -0.91
TRIM35Q9UPQ4 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
TRIM35Q9UPQ4 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
TRIM35Q9UPQ4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TRIM35Q9UPQ4 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
TRIM35Q9UPQ4 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms