Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 MTND4P21-201ENST00000453886 1357 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AL133268.1-201ENST00000405676 1401 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 RNU6-670P-201ENST00000364312 104 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 MIR7-1-201ENST00000384871 110 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AL050305.1-201ENST00000399993 1230 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC093162.1-201ENST00000419682 124 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 LINC00993-201ENST00000420453 540 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 CR848007.2-201ENST00000424918 787 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AL451139.1-201ENST00000434718 346 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 NMNAT1P2-201ENST00000435192 860 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 PSMD10P3-201ENST00000437000 448 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC004938.1-201ENST00000438468 308 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AL031584.1-201ENST00000447169 754 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 TRBV8-1-201ENST00000481590 279 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 RPSAP50-201ENST00000481955 852 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 RN7SL808P-201ENST00000496066 299 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 RNU6-513P-201ENST00000516104 104 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC104997.1-201ENST00000519761 717 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 RN7SL802P-201ENST00000577858 299 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AL121612.2-201ENST00000612261 482 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AC009032.1-201ENST00000617574 431 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 AP002799.1-201ENST00000623552 423 ntBASIC5.18□□□□□ -1.58
SIX2Q9NPC8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX2Q9NPC8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 RNA5SP305-201ENST00000362665 119 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 RNA5SP123-201ENST00000363244 119 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 RNU6-883P-201ENST00000384597 107 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 EIF4A1P1-201ENST00000420241 934 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 GLUD1P9-201ENST00000420997 1173 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 FABP7P2-201ENST00000429946 379 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 ZFAND6P1-201ENST00000434138 605 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AL590399.4-201ENST00000436561 601 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 MRPL48P1-201ENST00000445390 636 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 RPS15AP29-201ENST00000445539 400 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 OR2AF1P-201ENST00000454899 889 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 MTND2P39-201ENST00000457230 764 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AC108751.2-201ENST00000469993 231 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AC090589.1-201ENST00000473109 362 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 RN7SL629P-201ENST00000489622 285 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 BTF3P13-201ENST00000513224 490 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 OR5AZ1P-201ENST00000527448 943 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 MIR5699-201ENST00000578903 90 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AC144521.1-201ENST00000607148 956 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 CR788268.1-201ENST00000603931 1809 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 AP001642.1-201ENST00000624727 2117 ntBASIC5.17□□□□□ -1.58
SIX2Q9NPC8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SIX2Q9NPC8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX2Q9NPC8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms