Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 OR4K15-201ENST00000305051 1216 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 EIF4HP2-201ENST00000424380 563 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC068287.1-201ENST00000430283 295 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AL136455.1-201ENST00000441083 1240 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC004980.3-201ENST00000447046 365 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 RN7SL517P-201ENST00000462240 305 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 OR52A4P-201ENST00000472867 958 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC026688.1-201ENST00000520639 1168 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC007497.1-201ENST00000610421 561 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AL445487.1-201ENST00000415694 1580 ntBASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KIAA1549Q9HCM3 AC020633.1-201ENST00000468439 2247 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC100778.3-201ENST00000580060 1750 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC139713.2-214ENST00000642059 1811 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 RNU1-32P-201ENST00000363937 159 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 SNORA70F-201ENST00000384142 135 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 RN7SKP267-201ENST00000410381 285 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 REREP1Y-201ENST00000422655 198 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 REREP2Y-201ENST00000439103 200 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 IGKV1-32-201ENST00000519290 311 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 SOX5P1-201ENST00000524155 1127 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC133555.2-201ENST00000550213 292 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC022417.1-201ENST00000624768 1303 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC093849.1-201ENST00000563631 2209 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AL442128.2-201ENST00000620246 1824 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC068538.1-201ENST00000376856 336 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AL451139.1-201ENST00000434718 346 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 NDUFA5P9-201ENST00000472609 340 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC012123.2-201ENST00000485809 248 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC009852.2-201ENST00000567898 485 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 TVP23CP2-201ENST00000571473 623 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 AC023389.2-201ENST00000580031 955 ntBASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.29□□□□□ -1.72
KIAA1549Q9HCM3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AC104623.2-202ENST00000623477 4002 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 BX510359.2-201ENST00000417920 305 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms