Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 GNG5P2-201ENST00000372054 207 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 OR8V1P-201ENST00000395193 873 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC093578.1-201ENST00000415219 368 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AL451136.1-201ENST00000435399 325 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC105137.1-201ENST00000484355 562 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 EIF1P5-201ENST00000585002 234 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC107294.1-201ENST00000609524 467 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC140113.4-201ENST00000622087 222 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC090017.1-201ENST00000548612 1779 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 RN7SL802P-201ENST00000577858 299 ntBASIC4.53□□□□□ -1.68
CHD8Q9HCK8 ZNF833P-201ENST00000424938 1494 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AL590704.1-201ENST00000402856 794 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 YWHAZP2-201ENST00000440317 728 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 GLUD1P3-202ENST00000508551 200 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC010486.1-201ENST00000511793 424 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC053481.4-201ENST00000583164 216 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC013731.1-201ENST00000604340 883 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AL159169.3-201ENST00000608871 561 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC007068.1-201ENST00000396690 844 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 RPS17P8-201ENST00000434525 335 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC108475.1-201ENST00000507880 950 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 RPL7L1P13-201ENST00000511702 739 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 OR5BC1P-201ENST00000529327 739 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 AC006042.3-201ENST00000454684 1469 ntBASIC4.52□□□□□ -1.69
CHD8Q9HCK8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CHD8Q9HCK8 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 AC009951.1-201ENST00000623674 2614 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 AC108463.1-201ENST00000450258 347 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 AL136126.1-201ENST00000473603 402 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 MIR4433B-201ENST00000581329 102 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms