Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCSER1Q9C0I3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 RN7SKP95-201ENST00000362860 303 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AL589647.1-201ENST00000402485 466 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 EIF4HP2-201ENST00000424380 563 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC106901.1-201ENST00000425086 698 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC006455.6-201ENST00000426192 893 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 NPM1P22-201ENST00000427761 952 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC093414.1-201ENST00000434712 514 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 MTCYBP14-201ENST00000457471 715 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC116562.1-201ENST00000485355 781 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC011453.2-201ENST00000603737 729 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AL022401.1-201ENST00000619498 108 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AF117829.2-201ENST00000619538 361 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 CR381572.2-201ENST00000624852 397 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC006453.5-201ENST00000636451 619 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AL034370.1-201ENST00000397254 1590 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 AC008079.2-201ENST00000623543 20396 ntBASIC5.49□□□□□ -1.53
CCSER1Q9C0I3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 DDX18P5-201ENST00000534547 1306 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 RN7SKP104-201ENST00000362605 328 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 AL645733.1-201ENST00000402250 217 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 SNORA11B-201ENST00000408175 129 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 RGS17P1-201ENST00000423358 553 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 RHEBP2-201ENST00000450289 600 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 RN7SL558P-201ENST00000497468 299 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 OR5AZ1P-201ENST00000527448 943 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 OR5D15P-201ENST00000531671 942 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 AP000919.1-201ENST00000582850 985 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 STX3-208ENST00000641815 3236 ntBASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.48□□□□□ -1.53
CCSER1Q9C0I3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 U3.35-201ENST00000408405 208 ntBASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 TRY2P-201ENST00000448860 689 ntBASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 OTX2P1-201ENST00000450956 354 ntBASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 AC020890.1-201ENST00000491837 504 ntBASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 AGGF1P3-201ENST00000493675 1213 ntBASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 MTCO3P42-201ENST00000509488 518 ntBASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 AC110775.1-201ENST00000513721 462 ntBASIC5.47□□□□□ -1.53
CCSER1Q9C0I3 MTCO3P39-201ENST00000514812 518 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms