Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 IGBP1P3-201ENST00000447449 1000 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC073358.1-201ENST00000505671 684 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC109464.2-201ENST00000510242 943 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RNU6-1334P-201ENST00000516032 105 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RNU6-678P-201ENST00000516832 109 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC016957.1-201ENST00000534895 309 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC007954.1-201ENST00000554198 494 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AL121839.1-201ENST00000556233 1185 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 DYNLL1P1-201ENST00000595442 269 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC068790.7-201ENST00000602347 528 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC006924.1-201ENST00000610750 559 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AL121873.1-201ENST00000616013 524 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 MIR6861-201ENST00000618657 64 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC022509.4-201ENST00000621404 572 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 MSL3P1-202ENST00000440028 1468 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AL442128.2-201ENST00000620246 1824 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 VN2R3P-201ENST00000422626 1412 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC136624.1-201ENST00000400791 413 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 MTND1P21-201ENST00000412991 285 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 PAICSP7-201ENST00000419829 962 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AL022400.1-201ENST00000423946 935 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 DSTNP5-201ENST00000427921 523 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 CNOT7P1-201ENST00000429006 852 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 RPL12P16-201ENST00000431098 498 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 RPSAP40-201ENST00000442343 891 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC010240.2-201ENST00000445363 1205 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 ZNF114P1-201ENST00000453500 292 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AL035407.2-201ENST00000454090 378 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 H3F3AP5-201ENST00000475267 429 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 RPL7P18-201ENST00000478965 734 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC018797.1-201ENST00000510791 255 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 PRELID3BP4-201ENST00000515476 571 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 RNA5SP441-201ENST00000516809 88 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC087883.1-201ENST00000551882 391 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC026956.1-201ENST00000558741 396 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 MIR3912-201ENST00000577566 105 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC004805.3-201ENST00000603178 310 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC018714.1-201ENST00000605028 208 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC114477.1-201ENST00000605097 605 ntBASIC6.44□□□□□ -1.38
FOXP3Q9BZS1 AC004890.3-201ENST00000605566 1095 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms