Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 HSPD1P9-201ENST00000420325 1636 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC011503.2-201ENST00000594230 1500 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 RNA5SP110-201ENST00000362638 115 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 RNU6-1214P-201ENST00000363650 109 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 RNU6-224P-201ENST00000384055 107 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL136310.1-201ENST00000404926 654 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 SETP15-201ENST00000412724 337 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 LINC01347-201ENST00000417964 355 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 IPPKP1-201ENST00000422501 768 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 EEF1A1P39-201ENST00000440791 250 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 MRPL35P2-201ENST00000448009 511 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL445466.1-201ENST00000448432 357 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 OR51B8P-201ENST00000449892 769 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 PPIAP7-201ENST00000454070 489 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL445669.2-201ENST00000454425 421 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 HSPE1P22-201ENST00000456856 327 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC011037.1-201ENST00000483964 558 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC023050.1-201ENST00000498198 304 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 ENPP7P11-201ENST00000505915 627 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC109464.1-201ENST00000511091 819 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 PRMT5P1-201ENST00000514351 598 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AP000620.1-201ENST00000527147 504 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL356057.1-201ENST00000533798 831 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC023050.2-201ENST00000544968 387 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 GARSP1-201ENST00000570895 719 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC005951.1-201ENST00000576706 485 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 MIR3936-201ENST00000584304 110 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL109653.1-201ENST00000603091 248 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC092266.1-201ENST00000610958 165 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL096712.1-201ENST00000614561 159 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 RFPL4AP6-201ENST00000616792 846 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 MIR6133-201ENST00000617057 108 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC010975.3-201ENST00000618727 978 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC073569.3-201ENST00000619055 682 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL121895.2-201ENST00000619558 447 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 AL158062.1-201ENST00000619632 745 ntBASIC5.28□□□□□ -1.56
SNX18Q96RF0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SNX18Q96RF0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX18Q96RF0 AC239868.2-201ENST00000564237 4527 ntBASIC5.27□□□□□ -1.57
SNX18Q96RF0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SNX18Q96RF0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX18Q96RF0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SNX18Q96RF0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX18Q96RF0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
SNX18Q96RF0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX18Q96RF0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SNX18Q96RF0 RNA5SP27-201ENST00000363839 119 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms