Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR5708-201ENST00000579723 85 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 AC233702.7-202ENST00000582941 211 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 AL356055.1-201ENST00000602528 446 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 AC091193.1-201ENST00000604640 448 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 AC091965.4-201ENST00000607691 587 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 Z99129.1-201ENST00000612510 255 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 AL022323.4-201ENST00000623980 13120 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 RBMY1HP-201ENST00000382759 1389 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 MTND4P29-201ENST00000503122 1372 ntBASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.06□□□□□ -1.28
SYNGAP1Q96PV0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 OR56B2P-201ENST00000317102 954 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 FAM32BP-201ENST00000344033 333 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AL139421.1-201ENST00000423010 169 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AL121776.1-201ENST00000429337 372 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AL121601.2-201ENST00000438019 707 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC098614.3-201ENST00000438957 440 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC091153.1-201ENST00000466297 402 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC104763.1-201ENST00000475274 360 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 RN7SL717P-201ENST00000478343 297 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 OR7E157P-201ENST00000494376 911 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC093281.2-201ENST00000510153 597 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 RNU6-678P-201ENST00000516832 109 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 IGLV2-28-201ENST00000520681 304 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AL592221.1-201ENST00000605266 382 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC109454.4-201ENST00000623411 649 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC092447.7-201ENST00000422212 1621 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AL359976.1-201ENST00000418655 3528 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC007342.5-201ENST00000571340 2142 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 NEPNP-201ENST00000404786 1371 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 AC024651.2-201ENST00000562480 2098 ntBASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SYNGAP1Q96PV0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 TMSB4XP4-201ENST00000323496 618 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 IL6STP1-201ENST00000346911 1020 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 Y_RNA.88-201ENST00000363029 99 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 RNA5SP350-201ENST00000363298 111 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 MIR548F1-201ENST00000408667 84 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 RPL7P8-201ENST00000411964 730 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 RPL26P37-201ENST00000411983 438 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 BTF3P9-201ENST00000418784 283 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 RPL21P43-201ENST00000425440 472 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 IPMKP1-201ENST00000425988 855 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 MTCO2P19-201ENST00000427513 598 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC104651.1-201ENST00000427559 735 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 ETF1P3-201ENST00000430422 1160 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 MED14P1-201ENST00000430517 648 ntBASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNGAP1Q96PV0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms