Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RPL23AP56-201ENST00000460778 453 ntBASIC5.13□□□□□ -1.59
CCDC42Q96M95 UBA52P7-201ENST00000486088 380 ntBASIC5.13□□□□□ -1.59
CCDC42Q96M95 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC42Q96M95 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC42Q96M95 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC42Q96M95 AC004825.1-201ENST00000555068 586 ntBASIC5.13□□□□□ -1.59
CCDC42Q96M95 RPL21P7-201ENST00000557463 483 ntBASIC5.13□□□□□ -1.59
CCDC42Q96M95 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC42Q96M95 AC140113.4-201ENST00000622087 222 ntBASIC5.13□□□□□ -1.59
CCDC42Q96M95 AL359757.1-201ENST00000623176 255 ntBASIC5.13□□□□□ -1.59
CCDC42Q96M95 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC42Q96M95 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC42Q96M95 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC42Q96M95 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC42Q96M95 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CCDC42Q96M95 AC099654.2-201ENST00000433031 1980 ntBASIC5.13□□□□□ -1.59
CCDC42Q96M95 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC42Q96M95 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC42Q96M95 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC42Q96M95 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC42Q96M95 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC42Q96M95 OR56B2P-201ENST00000317102 954 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC42Q96M95 U3.25-201ENST00000391209 220 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 RAB5CP1-201ENST00000395972 580 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC42Q96M95 CBX1P3-201ENST00000413296 527 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 GTF2IP5-201ENST00000414608 731 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 LINC00993-201ENST00000420453 540 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 OR2AM1P-201ENST00000422137 422 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 RPL7P57-201ENST00000423238 740 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 SETP10-201ENST00000424368 814 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC42Q96M95 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC42Q96M95 RN7SL172P-201ENST00000460535 303 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 RPS18P6-201ENST00000476880 458 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 RPL7P51-201ENST00000490532 749 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC42Q96M95 MRPS33P2-201ENST00000507850 322 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC42Q96M95 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC42Q96M95 AC092490.3-201ENST00000545370 572 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC42Q96M95 ATP5J2P6-201ENST00000565203 266 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 MEMO1P5-201ENST00000604810 406 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 AC004232.3-201ENST00000622977 525 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC42Q96M95 AC011815.3-201ENST00000624194 473 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 DDX18P4-201ENST00000511690 1966 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC42Q96M95 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC42Q96M95 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC42Q96M95 MTCO1P15-201ENST00000529569 1526 ntBASIC5.12□□□□□ -1.59
CCDC42Q96M95 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 MIR921-201ENST00000401133 56 ntBASIC5.11□□□□□ -1.59
CCDC42Q96M95 SEPT7P8-201ENST00000413308 775 ntBASIC5.11□□□□□ -1.59
CCDC42Q96M95 CEACAMP8-201ENST00000413902 580 ntBASIC5.11□□□□□ -1.59
CCDC42Q96M95 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 AC079841.1-201ENST00000481228 950 ntBASIC5.11□□□□□ -1.59
CCDC42Q96M95 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 GSTP1P1-201ENST00000548078 319 ntBASIC5.11□□□□□ -1.59
CCDC42Q96M95 AC093799.2-201ENST00000610062 578 ntBASIC5.11□□□□□ -1.59
CCDC42Q96M95 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC42Q96M95 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 EOGT-210ENST00000615922 1931 ntBASIC5.11□□□□□ -1.59
CCDC42Q96M95 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC42Q96M95 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC42Q96M95 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC42Q96M95 MIR223-201ENST00000385204 110 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC42Q96M95 VDAC1P9-201ENST00000412766 841 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 AC009237.10-201ENST00000414112 510 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 GJA6P-201ENST00000415117 1042 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC42Q96M95 AC079807.1-201ENST00000429993 481 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC42Q96M95 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC42Q96M95 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC42Q96M95 AL645937.3-201ENST00000453647 936 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 AC022795.1-201ENST00000473808 480 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 AC090114.3-201ENST00000479267 829 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC42Q96M95 DEFB109F-201ENST00000491870 277 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 AC104109.1-201ENST00000498563 436 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 AC138409.2-202ENST00000507274 458 ntBASIC5.1□□□□□ -1.59
CCDC42Q96M95 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC42Q96M95 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms