Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL121886.1-201ENST00000358609 435 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 RNA5SP326-201ENST00000363209 110 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 RNU6-452P-201ENST00000384406 107 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 RNU6-244P-201ENST00000391028 104 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL035419.1-201ENST00000397037 564 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 RPS6P23-201ENST00000413224 722 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 VTA1P1-201ENST00000414044 866 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 BMS1P17-202ENST00000416720 316 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 OR5M12P-201ENST00000423388 929 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC113412.1-201ENST00000425840 504 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 TMEM183AP1-205ENST00000432739 290 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 SUMO2P3-201ENST00000438311 288 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC002542.1-201ENST00000440683 193 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 CYCSP51-201ENST00000443545 318 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC005297.1-201ENST00000444765 862 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 MTND2P14-201ENST00000482139 351 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 RPL23AP44-201ENST00000482216 473 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 ATP5LP5-201ENST00000483050 299 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC010486.2-201ENST00000505572 483 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 CYCSP22-201ENST00000517555 339 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC090695.1-201ENST00000561269 1222 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC012146.2-201ENST00000576545 416 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC069366.1-201ENST00000583159 838 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC040904.1-201ENST00000590850 223 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC010503.3-201ENST00000594355 540 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL020997.3-201ENST00000602843 359 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC009237.15-201ENST00000610252 501 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 TUSC7.1-201ENST00000610969 165 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC092106.3-201ENST00000611308 722 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 MIR6862-1-201ENST00000613016 70 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 MIR6862-2-201ENST00000614755 70 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC079776.5-201ENST00000641920 211 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 SEC63P2-201ENST00000503863 1939 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 AC004076.2-201ENST00000620532 3323 ntBASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.26□□□□□ -1.57
CTHRC1Q96CG8 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 OR4F13P-202ENST00000560066 2054 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 SRRM1P3-201ENST00000426911 2678 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC006206.1-201ENST00000544842 3387 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 TMSB4XP4-201ENST00000323496 618 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 RNU6-1214P-201ENST00000363650 109 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL512422.1-201ENST00000407033 553 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL356320.2-201ENST00000417263 507 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC234781.4-201ENST00000419384 244 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 MTND2P18-201ENST00000419962 1030 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 MFSD13B-201ENST00000420133 1290 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 RPL34P3-201ENST00000421454 338 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 OR6K4P-201ENST00000423179 955 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms