Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 AL049794.2-201ENST00000616301 365 ntBASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 AP003072.5-201ENST00000623872 773 ntBASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 AC138627.1-204ENST00000641894 765 ntBASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 AC092111.2-201ENST00000611627 1414 ntBASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 NXF4-202ENST00000416098 1465 ntBASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 MTCO1P15-201ENST00000529569 1526 ntBASIC4.09□□□□□ -1.75
RTN4IP1Q8WWV3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.09□□□□□ -1.76
RTN4IP1Q8WWV3 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RTN4IP1Q8WWV3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
RTN4IP1Q8WWV3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RTN4IP1Q8WWV3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RTN4IP1Q8WWV3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC000123.3-201ENST00000624029 4975 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 RNU1-83P-201ENST00000363426 164 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 VDAC2P1-201ENST00000399358 958 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 U3.35-201ENST00000408405 208 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 RNU2-22P-201ENST00000411266 212 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 GTF3AP1-201ENST00000416942 1004 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 RPS27P18-201ENST00000431701 247 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC004938.1-201ENST00000438468 308 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 Z80107.2-201ENST00000445127 392 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AL589765.3-201ENST00000446084 462 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 NDUFA5P8-201ENST00000449019 346 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 OR2AF1P-201ENST00000454899 889 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 RN7SL515P-201ENST00000463999 297 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 HMGN2P25-201ENST00000486956 268 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC006499.3-201ENST00000506077 748 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 CIR1P2-201ENST00000514821 1342 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 RNA5SP92-201ENST00000516437 110 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 IGLV2-28-201ENST00000520681 304 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 THAP12P4-201ENST00000528321 2266 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC092490.3-201ENST00000545370 572 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 NMNAT1P1-201ENST00000554095 876 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC087477.6-201ENST00000559595 843 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC105254.2-201ENST00000603636 436 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AL121612.2-201ENST00000612261 482 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC234782.5-201ENST00000617723 324 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AC012414.7-202ENST00000622705 1090 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 AL672167.1-203ENST00000641299 2975 ntBASIC4.08□□□□□ -1.76
RTN4IP1Q8WWV3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 AC027290.2-201ENST00000623210 18662 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 RBPJP2-201ENST00000618187 1444 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 BMS1P3-201ENST00000372011 932 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 RN7SKP273-201ENST00000411392 314 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 E2F6P2-201ENST00000420708 748 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 AC013268.2-201ENST00000420753 337 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 AL034379.1-201ENST00000423216 253 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 FABP7P1-201ENST00000424004 391 ntBASIC4.07□□□□□ -1.76
RTN4IP1Q8WWV3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms