Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 IGKV2-23-201ENST00000518729 323 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 IGKV1OR2-9-201ENST00000603957 287 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 IGKV1OR2-11-201ENST00000604120 287 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 KARSP3-201ENST00000571212 1504 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC073465.2-201ENST00000440938 498 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC097486.1-201ENST00000515331 210 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 NPM1P5-201ENST00000557228 838 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC023575.1-201ENST00000580510 358 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 CASC19-221ENST00000641309 1382 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 ADAM5-202ENST00000399789 1942 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC120338.1-201ENST00000625074 1541 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 Y_RNA.333-201ENST00000365274 102 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 SLC9B1P4-201ENST00000421957 1288 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 OR4C10P-201ENST00000434991 931 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 NPM1P33-201ENST00000438918 872 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 RN7SKP276-201ENST00000516242 268 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AP002981.1-201ENST00000517692 975 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AGGF1P7-201ENST00000562369 913 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 OR2B7P-201ENST00000429302 934 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AL450023.3-201ENST00000440592 271 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 RN7SL814P-201ENST00000487715 300 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 RN7SKP83-201ENST00000516512 178 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AL512782.1-201ENST00000603093 364 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AP001157.1-201ENST00000550837 2339 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AL049693.1-201ENST00000402760 611 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC013701.1-201ENST00000522657 465 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC006130.2-201ENST00000586202 326 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 BNIP3P35-201ENST00000604530 490 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC022106.2-201ENST00000620114 757 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC008785.1-201ENST00000624475 456 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AL158152.1-201ENST00000602652 1435 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE1Q8NF91 RNA5SP397-201ENST00000391323 118 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AL732292.1-201ENST00000426692 226 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 RPL23AP72-201ENST00000492447 435 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 AC111000.6-201ENST00000514471 709 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 OR8G5-201ENST00000524943 1041 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 GTF2IP11-201ENST00000526931 420 ntBASIC1.5□□□□□ -2.17
SYNE1Q8NF91 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 351.2 ms