Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC008410.1-201ENST00000483777 339 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 RPL32P9-201ENST00000487963 407 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 RPS23P1-201ENST00000491662 432 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 OR2A3P-201ENST00000493774 953 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC147055.3-201ENST00000510547 851 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC244517.3-201ENST00000616254 1235 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AL049794.2-201ENST00000616301 365 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC004232.3-201ENST00000622977 525 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 ICE2P1-201ENST00000512800 1849 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC112Q8NEF3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 RNU1-20P-201ENST00000363314 162 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 RNA5SP507-201ENST00000363603 121 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 RNU6-171P-201ENST00000384354 107 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 MIR937-201ENST00000401271 86 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 FAM96AP1-201ENST00000430879 482 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 RPL7L1P9-201ENST00000431298 745 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 CYCSP6-201ENST00000434498 302 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC004938.1-201ENST00000438468 308 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC104971.1-201ENST00000495117 578 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC093890.1-201ENST00000502554 540 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC026688.1-201ENST00000520639 1168 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC012414.7-202ENST00000622705 1090 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC055839.1-201ENST00000634467 498 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 CYP4F35P-202ENST00000636121 390 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC006453.5-201ENST00000636451 619 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 IRF5P1-201ENST00000504852 2164 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 AC091046.3-201ENST00000631455 1574 ntBASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC112Q8NEF3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 SNORA70.10-201ENST00000384515 134 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 VDAC1P9-201ENST00000412766 841 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AL133325.1-201ENST00000421090 382 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 PPIAP13-201ENST00000434706 478 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AL354714.3-201ENST00000447284 493 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC024558.1-201ENST00000505008 528 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 RNA5SP92-201ENST00000516437 110 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 RNA5SP360-201ENST00000516555 118 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC087477.6-201ENST00000559595 843 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 SNX18P1Y-201ENST00000616231 511 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 AC017104.4-201ENST00000636283 1592 ntBASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC112Q8NEF3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms