Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL672167.2-201ENST00000377164 879 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 CHMP1B2P-201ENST00000399581 597 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 RPL10P10-201ENST00000403509 664 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 MTND6P5-201ENST00000448266 512 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 AC018638.3-201ENST00000461273 132 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 AC074386.1-201ENST00000476560 767 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 RN7SL177P-201ENST00000476596 299 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 AC116562.1-201ENST00000485355 781 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 HNRNPRP2-201ENST00000528421 743 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 BNIP3P1-201ENST00000547295 580 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 HMGN2P6-201ENST00000551091 273 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 AC009643.2-201ENST00000603543 1448 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 AC092111.2-201ENST00000611627 1414 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC107068.1-201ENST00000563286 4218 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC120338.1-201ENST00000625074 1541 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC008758.3-201ENST00000507003 1829 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AL731532.2-201ENST00000623542 1953 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 MIR323B-201ENST00000385269 82 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 HCFC2P1-201ENST00000392864 1592 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AL357515.1-201ENST00000402967 542 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 Z95327.2-201ENST00000414579 1873 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 TBCAP2-201ENST00000416175 326 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 TET1P1-201ENST00000426627 2301 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC013410.1-201ENST00000436223 1232 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 CEACAMP7-201ENST00000444105 496 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC000111.2-201ENST00000448200 210 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 RPS4XP14-201ENST00000493072 781 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 RPL37AP8-201ENST00000494116 276 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AL008729.2-201ENST00000606393 473 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AL731566.1-201ENST00000620490 1937 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC093909.5-201ENST00000621839 1799 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 DDX18P5-201ENST00000534547 1306 ntBASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC65Q8IXS2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 SNORA70-201ENST00000384436 135 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 RPL23AP27-201ENST00000415161 451 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 TMBIM7P-201ENST00000418074 855 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AL034379.1-201ENST00000423216 253 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 RPL34P6-201ENST00000432390 345 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AL627308.1-201ENST00000435693 821 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC026348.1-201ENST00000462549 1053 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 MRPS33P2-201ENST00000507850 322 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 HMGB3P16-201ENST00000508037 287 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 CYCSP40-201ENST00000575927 294 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 SNORA74C-1-201ENST00000580726 201 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC087763.1-201ENST00000603391 286 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC133552.5-201ENST00000604266 540 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC096553.1-201ENST00000605169 829 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AP001521.2-201ENST00000608772 546 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms