Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL390334.1-201ENST00000556395 450 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC127024.5-201ENST00000580085 462 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 MIR4443-201ENST00000585052 53 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC024940.4-201ENST00000605507 246 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 RNU6-84P-201ENST00000607737 102 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC016911.1-201ENST00000613297 452 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AL445528.2-201ENST00000620582 470 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC019206.1-201ENST00000621938 425 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AP005432.1-201ENST00000580891 3485 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC099654.2-201ENST00000433031 1980 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC133552.1-201ENST00000569988 4007 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 RNU6-697P-201ENST00000363348 107 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 MIR550A3-201ENST00000390735 95 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AL359643.1-201ENST00000404109 423 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 GTF2IP5-201ENST00000414608 731 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 COX6B1P1-201ENST00000415962 213 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC013429.2-201ENST00000418798 781 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 Z85994.2-201ENST00000434327 452 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 MRPL35P2-201ENST00000448009 511 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC116562.1-201ENST00000485355 781 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 RN7SL346P-201ENST00000491561 294 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 RN7SL591P-201ENST00000496150 292 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 RFPL4AP3-201ENST00000515267 345 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AGGF1P9-201ENST00000561884 913 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC020915.5-201ENST00000596836 964 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 QTRT1P1-201ENST00000604344 1078 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC104687.2-201ENST00000604442 342 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AP001521.2-201ENST00000608772 546 ntBASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
C9orf40Q8IXQ3 AC104623.2-202ENST00000623477 4002 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 PCAT14-202ENST00000627127 3935 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 HMGB3P7-201ENST00000400214 611 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 AL357515.1-201ENST00000402967 542 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 TBCAP2-201ENST00000416175 326 ntBASIC4.56□□□□□ -1.68
C9orf40Q8IXQ3 QRSL1P2-201ENST00000418582 964 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms