Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC005410.1-202ENST00000460347 485 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 RPS23P2-201ENST00000463671 415 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC004815.1-201ENST00000484185 331 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 OR51A1P-201ENST00000511110 946 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC074255.1-201ENST00000511259 501 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 IGLV3-24-201ENST00000517477 197 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 RPL12P22-201ENST00000519073 490 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 MRPS16P1-201ENST00000523462 412 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 TRIM51DP-201ENST00000529746 596 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 HMGB1P42-201ENST00000532126 553 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 OR5AM1P-201ENST00000532136 1032 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AL512310.9-201ENST00000553311 948 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 HNRNPCP1-201ENST00000556181 766 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AP001981.2-201ENST00000603241 418 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AL590229.1-201ENST00000603497 542 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 MIR6861-201ENST00000618657 64 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VRK3Q8IV63 Z69908.1-201ENST00000622603 247 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AL359740.1-201ENST00000624340 592 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC069542.2-201ENST00000624816 216 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 AC087565.3-203ENST00000641018 837 ntBASIC5.58□□□□□ -1.52
VRK3Q8IV63 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VRK3Q8IV63 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.58□□□□□ -1.52
VRK3Q8IV63 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC104964.3-201ENST00000606115 2860 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 SRRM1P3-201ENST00000426911 2678 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 RNA5SP326-201ENST00000363209 110 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 RNU6-252P-201ENST00000363232 107 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 RNU6-236P-201ENST00000363886 106 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 RNA5SP510-201ENST00000364697 99 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 RNA5SP30-201ENST00000365552 115 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 RPS3AP2-201ENST00000407190 754 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC096921.1-201ENST00000411661 375 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 RPS6P23-201ENST00000413224 722 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 METTL15P3-201ENST00000415522 1221 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 NAP1L4P2-201ENST00000425958 899 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL160175.1-201ENST00000428124 247 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL022331.1-201ENST00000429025 477 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 RPS29P14-201ENST00000431518 171 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 TAF9P1-201ENST00000445421 515 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL445665.1-202ENST00000452436 324 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 TAF9P2-201ENST00000454958 515 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL133477.1-201ENST00000457472 514 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC007998.1-201ENST00000474156 672 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC080014.1-201ENST00000496877 1201 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC108475.1-201ENST00000507880 950 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC133963.2-201ENST00000513686 578 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC138938.1-201ENST00000515431 782 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms