Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AC002456.2-201ENST00000509356 380 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 KCTD9P2-201ENST00000512203 1013 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 FAM92A1P1-201ENST00000528023 890 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 TRIM51DP-201ENST00000529746 596 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 OR5F2P-201ENST00000532761 941 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 DPPA3P2-201ENST00000553589 478 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 BNIP3P11-201ENST00000603878 563 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AC013553.2-201ENST00000604244 589 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 SUGT1P3-202ENST00000604259 383 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AC008115.3-201ENST00000614874 549 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AC112487.2-201ENST00000637950 304 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AL596275.2-203ENST00000641951 371 ntBASIC7.44□□□□□ -1.22
RNF135Q8IUD6 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF135Q8IUD6 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC004014.2-201ENST00000623718 5122 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 Y_RNA.326-201ENST00000365176 113 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 RNU6-1227P-201ENST00000383981 107 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 SNORA68-201ENST00000384437 133 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 VN1R36P-201ENST00000414936 291 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 RPS3AP9-201ENST00000417027 792 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 NIPA2P1-201ENST00000426223 976 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC092809.1-201ENST00000441469 474 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 GAPDHP17-201ENST00000449858 1001 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 SLC31A1P1-201ENST00000451221 567 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 GLRXP3-201ENST00000470810 321 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC040975.1-201ENST00000472104 316 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC093878.1-201ENST00000515630 432 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 OR8A2P-201ENST00000528631 952 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AL157394.1-201ENST00000562983 1224 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 RN7SL230P-201ENST00000580835 303 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC012368.3-201ENST00000604190 219 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC068726.1-201ENST00000610993 341 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 RN7SL261P-201ENST00000613441 282 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC010205.1-201ENST00000616668 449 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC104010.1-201ENST00000616889 150 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 U1.34-201ENST00000618578 162 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC011471.4-201ENST00000638271 216 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AC021242.1-201ENST00000507315 2035 ntBASIC7.43□□□□□ -1.22
RNF135Q8IUD6 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms