Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SNORA70.6-201ENST00000383934 134 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 SNORD56.6-201ENST00000384569 71 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AL356057.1-202ENST00000402263 756 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 SETP15-201ENST00000412724 337 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC079355.1-201ENST00000421770 223 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC009965.2-201ENST00000425328 970 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 RPL12P28-201ENST00000430852 489 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC007000.2-201ENST00000442564 487 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AL133445.1-201ENST00000467051 452 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 SIAH1P1-201ENST00000479411 923 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 RN7SL447P-201ENST00000494711 245 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 PGBD4P4-201ENST00000509673 613 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC109464.1-201ENST00000511091 819 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 ATP5LP3-201ENST00000514223 304 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 RNU6-347P-201ENST00000516658 105 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 HIGD1AP18-201ENST00000520730 278 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 IGKV2-18-201ENST00000522607 343 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC007225.2-201ENST00000562529 256 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AL096803.3-201ENST00000609032 532 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC025016.1-201ENST00000616746 682 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC005840.5-201ENST00000619166 599 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AL512283.1-201ENST00000606756 1384 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 SRSF1P1-201ENST00000424058 520 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC073069.1-201ENST00000428657 441 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC012497.1-201ENST00000429392 575 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 CYCSP12-201ENST00000437729 300 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AL357520.1-201ENST00000441557 453 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 RPS11P7-201ENST00000442125 465 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 HMGB1P26-201ENST00000452520 628 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC005229.2-201ENST00000456995 399 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AP000942.1-201ENST00000463969 747 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 MTCO1P31-201ENST00000506355 492 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC098976.1-201ENST00000513014 541 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AF186190.1-201ENST00000517470 480 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC068993.1-201ENST00000546724 589 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 BLZF2P-201ENST00000553776 1130 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 NPM1P47-201ENST00000560843 856 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC005341.1-201ENST00000571086 708 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 VN1R84P-201ENST00000593697 235 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 MTCO3P22-201ENST00000603219 784 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC092574.1-201ENST00000609771 420 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AL512506.1-201ENST00000613918 449 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AL359513.1-201ENST00000614364 557 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC037198.3-201ENST00000616754 526 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 MIR6837-201ENST00000620884 64 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms