Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 RNU6-1251P-201ENST00000364502 107 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 SNORD115-48-201ENST00000364764 76 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 RN7SKP153-201ENST00000365026 316 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 AC124944.2-201ENST00000429866 1242 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 AL157884.3-201ENST00000448273 1184 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 AC092324.1-201ENST00000468671 324 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 RN7SL244P-201ENST00000493405 297 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 RNU6-513P-201ENST00000516104 104 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 CR383656.14-201ENST00000551951 406 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 AC087783.2-201ENST00000605070 562 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 AP006248.3-201ENST00000623580 594 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 CASC19-221ENST00000641309 1382 ntBASIC5.53□□□□□ -1.52
USP41Q3LFD5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.53□□□□□ -1.52
USP41Q3LFD5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP41Q3LFD5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP41Q3LFD5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC010132.2-201ENST00000295493 1043 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 SNORD51.1-201ENST00000365405 77 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 OR13C3-201ENST00000374781 1108 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP41Q3LFD5 RN7SKP114-201ENST00000410327 279 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 RPA2P2-201ENST00000419698 796 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 MTND4P24-201ENST00000424002 397 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 SNRPFP2-201ENST00000440710 251 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 H2AFZP6-201ENST00000444403 394 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 AL161722.1-201ENST00000446972 1032 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 RPL7P16-201ENST00000479738 738 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC069304.1-201ENST00000491593 704 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 RPS24P16-201ENST00000497294 392 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 HMGN1P9-201ENST00000515212 298 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 FTH1P11-201ENST00000517577 551 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC008033.2-201ENST00000542626 177 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC008126.1-201ENST00000549019 480 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 MIR4691-201ENST00000583764 85 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 CR589904.2-201ENST00000612533 440 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC006249.1-201ENST00000621223 471 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 AC245100.2-201ENST00000454544 1679 ntBASIC5.52□□□□□ -1.53
USP41Q3LFD5 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP41Q3LFD5 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP41Q3LFD5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.52□□□□□ -1.53
USP41Q3LFD5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP41Q3LFD5 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.51□□□□□ -1.53
USP41Q3LFD5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
USP41Q3LFD5 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP41Q3LFD5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP41Q3LFD5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP41Q3LFD5 AC083843.2-201ENST00000568248 6253 ntBASIC5.51□□□□□ -1.53
USP41Q3LFD5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP41Q3LFD5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 800.1 ms