Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MIR548Y-201ENST00000582739 110 ntBASIC5.66□□□□□ -1.5
PER3P56645 AP001542.2-201ENST00000593141 364 ntBASIC5.66□□□□□ -1.5
PER3P56645 AC068790.7-201ENST00000602347 528 ntBASIC5.66□□□□□ -1.5
PER3P56645 AC125494.2-201ENST00000602431 657 ntBASIC5.66□□□□□ -1.5
PER3P56645 BNIP3P4-201ENST00000604946 565 ntBASIC5.66□□□□□ -1.5
PER3P56645 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PER3P56645 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.66□□□□□ -1.5
PER3P56645 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.66□□□□□ -1.5
PER3P56645 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.66□□□□□ -1.5
PER3P56645 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.66□□□□□ -1.5
PER3P56645 AP000550.3-201ENST00000637734 379 ntBASIC5.66□□□□□ -1.5
PER3P56645 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PER3P56645 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.66□□□□□ -1.5
PER3P56645 AL354854.1-201ENST00000455940 1363 ntBASIC5.66□□□□□ -1.5
PER3P56645 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PER3P56645 NSRP1P1-201ENST00000444067 1693 ntBASIC5.66□□□□□ -1.5
PER3P56645 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.66□□□□□ -1.5
PER3P56645 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PER3P56645 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
PER3P56645 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.65□□□□□ -1.5
PER3P56645 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PER3P56645 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.65□□□□□ -1.5
PER3P56645 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PER3P56645 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PER3P56645 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
PER3P56645 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PER3P56645 RNU6-707P-201ENST00000364647 95 ntBASIC5.65□□□□□ -1.5
PER3P56645 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PER3P56645 Y_RNA.465-201ENST00000384293 102 ntBASIC5.65□□□□□ -1.5
PER3P56645 MIR130B-202ENST00000385018 82 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC093719.1-202ENST00000392735 373 ntBASIC5.65□□□□□ -1.5
PER3P56645 AL050335.1-201ENST00000396909 869 ntBASIC5.65□□□□□ -1.5
PER3P56645 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 RNU6-575P-201ENST00000411326 105 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC092745.2-202ENST00000411880 369 ntBASIC5.65□□□□□ -1.5
PER3P56645 SETP15-201ENST00000412724 337 ntBASIC5.65□□□□□ -1.5
PER3P56645 LINC01881-201ENST00000416103 412 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 MTND4P20-201ENST00000424125 869 ntBASIC5.65□□□□□ -1.5
PER3P56645 AL121776.1-201ENST00000429337 372 ntBASIC5.65□□□□□ -1.5
PER3P56645 MTND1P20-201ENST00000430341 950 ntBASIC5.65□□□□□ -1.5
PER3P56645 CDY14P-201ENST00000431260 1014 ntBASIC5.65□□□□□ -1.5
PER3P56645 HMGB3P10-201ENST00000434734 572 ntBASIC5.65□□□□□ -1.5
PER3P56645 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 RPL7P29-201ENST00000437151 728 ntBASIC5.65□□□□□ -1.5
PER3P56645 OR3D1P-201ENST00000438288 955 ntBASIC5.65□□□□□ -1.5
PER3P56645 CACYBPP1-201ENST00000438592 684 ntBASIC5.65□□□□□ -1.5
PER3P56645 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.65□□□□□ -1.5
PER3P56645 CDY23P-201ENST00000451661 1014 ntBASIC5.65□□□□□ -1.5
PER3P56645 MRPL42P4-201ENST00000453267 443 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC011476.1-201ENST00000466725 307 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC021205.1-201ENST00000468797 348 ntBASIC5.65□□□□□ -1.5
PER3P56645 RN7SL326P-201ENST00000477493 296 ntBASIC5.65□□□□□ -1.5
PER3P56645 RN7SL273P-201ENST00000481561 299 ntBASIC5.65□□□□□ -1.5
PER3P56645 COX6B1P2-201ENST00000489624 230 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC008638.1-201ENST00000506035 866 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 AC112191.2-201ENST00000522428 333 ntBASIC5.65□□□□□ -1.5
PER3P56645 MTCO1P49-201ENST00000523429 802 ntBASIC5.65□□□□□ -1.5
PER3P56645 AP003033.1-201ENST00000527244 415 ntBASIC5.65□□□□□ -1.5
PER3P56645 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 AC092121.1-201ENST00000569452 202 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.65□□□□□ -1.5
PER3P56645 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.65□□□□□ -1.5
PER3P56645 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.65□□□□□ -1.5
PER3P56645 AC124312.4-201ENST00000605533 310 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC022467.1-201ENST00000614738 749 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.65□□□□□ -1.5
PER3P56645 AC021106.3-201ENST00000623925 531 ntBASIC5.65□□□□□ -1.5
PER3P56645 AC092608.3-201ENST00000625017 386 ntBASIC5.65□□□□□ -1.5
PER3P56645 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PER3P56645 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PER3P56645 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
PER3P56645 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PER3P56645 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PER3P56645 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PER3P56645 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.65□□□□□ -1.51
PER3P56645 AL359091.1-201ENST00000449048 1734 ntBASIC5.65□□□□□ -1.51
PER3P56645 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PER3P56645 CASC19-206ENST00000641028 1430 ntBASIC5.65□□□□□ -1.51
PER3P56645 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.65□□□□□ -1.51
PER3P56645 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PER3P56645 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.65□□□□□ -1.51
PER3P56645 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PER3P56645 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms