Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 MTCYBP12-201ENST00000440559 1134 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 AC044797.1-201ENST00000445744 679 ntBASIC4.3□□□□□ -1.72
PAX9P55771 BTF3P6-201ENST00000448054 499 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.3□□□□□ -1.72
PAX9P55771 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 RNU6-599P-201ENST00000459383 107 ntBASIC4.3□□□□□ -1.72
PAX9P55771 RNU6-1193P-201ENST00000459461 107 ntBASIC4.3□□□□□ -1.72
PAX9P55771 RPL7P41-201ENST00000485823 957 ntBASIC4.3□□□□□ -1.72
PAX9P55771 RN7SL423P-201ENST00000486202 304 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AC025458.1-201ENST00000506046 166 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PAX9P55771 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 SNORA31.13-201ENST00000516624 135 ntBASIC4.3□□□□□ -1.72
PAX9P55771 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.3□□□□□ -1.72
PAX9P55771 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PAX9P55771 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.3□□□□□ -1.72
PAX9P55771 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 AC079905.1-201ENST00000549280 475 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AC107958.1-201ENST00000556576 290 ntBASIC4.3□□□□□ -1.72
PAX9P55771 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 MIR4675-201ENST00000577898 77 ntBASIC4.3□□□□□ -1.72
PAX9P55771 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PAX9P55771 AC124283.4-201ENST00000581815 456 ntBASIC4.3□□□□□ -1.72
PAX9P55771 RN7SL356P-201ENST00000582228 248 ntBASIC4.3□□□□□ -1.72
PAX9P55771 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.3□□□□□ -1.72
PAX9P55771 AC011492.1-201ENST00000600023 315 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.3□□□□□ -1.72
PAX9P55771 AC011626.1-201ENST00000604710 562 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AC017076.1-201ENST00000607613 578 ntBASIC4.3□□□□□ -1.72
PAX9P55771 VN1R9P-201ENST00000614184 867 ntBASIC4.3□□□□□ -1.72
PAX9P55771 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
PAX9P55771 BX005214.3-202ENST00000619809 325 ntBASIC4.3□□□□□ -1.72
PAX9P55771 RNU6-368P-201ENST00000620928 107 ntBASIC4.3□□□□□ -1.72
PAX9P55771 RNU6-538P-201ENST00000622329 107 ntBASIC4.3□□□□□ -1.72
PAX9P55771 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.3□□□□□ -1.72
PAX9P55771 AP000648.2-201ENST00000624182 404 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AC073593.1-201ENST00000624500 411 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AC099654.9-201ENST00000637055 678 ntBASIC4.3□□□□□ -1.72
PAX9P55771 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PAX9P55771 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PAX9P55771 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PAX9P55771 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.3□□□□□ -1.72
PAX9P55771 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PAX9P55771 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PAX9P55771 AC005005.4-201ENST00000623789 16698 ntBASIC4.29□□□□□ -1.72
PAX9P55771 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.29□□□□□ -1.72
PAX9P55771 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PAX9P55771 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PAX9P55771 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PAX9P55771 CASC19-221ENST00000641309 1382 ntBASIC4.29□□□□□ -1.72
PAX9P55771 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PAX9P55771 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PAX9P55771 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.29□□□□□ -1.72
PAX9P55771 RLIMP2-201ENST00000427891 1563 ntBASIC4.29□□□□□ -1.72
PAX9P55771 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PAX9P55771 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PAX9P55771 RNU6-468P-201ENST00000384003 109 ntBASIC4.29□□□□□ -1.72
PAX9P55771 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PAX9P55771 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
PAX9P55771 HMGB3P19-201ENST00000403971 560 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC007738.1-201ENST00000413892 348 ntBASIC4.29□□□□□ -1.72
PAX9P55771 OR5M12P-201ENST00000423388 929 ntBASIC4.29□□□□□ -1.72
PAX9P55771 MTCYBP32-201ENST00000427945 1084 ntBASIC4.29□□□□□ -1.72
PAX9P55771 HMGB3P10-201ENST00000434734 572 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.29□□□□□ -1.72
PAX9P55771 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.29□□□□□ -1.72
PAX9P55771 OR6D1P-201ENST00000436165 939 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.29□□□□□ -1.72
PAX9P55771 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.29□□□□□ -1.72
PAX9P55771 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.29□□□□□ -1.72
PAX9P55771 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PAX9P55771 HMGB1P26-201ENST00000452520 628 ntBASIC4.29□□□□□ -1.72
PAX9P55771 RPS20P4-201ENST00000461659 355 ntBASIC4.29□□□□□ -1.72
PAX9P55771 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.29□□□□□ -1.72
PAX9P55771 RPS23P6-201ENST00000466136 431 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC092754.1-201ENST00000472975 479 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC104982.1-201ENST00000478775 574 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC037198.2-201ENST00000478845 733 ntBASIC4.29□□□□□ -1.72
PAX9P55771 HMGB1P38-201ENST00000490557 577 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC022133.1-201ENST00000490961 571 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.29□□□□□ -1.72
PAX9P55771 NENFP3-201ENST00000503735 313 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC010374.1-201ENST00000503762 1237 ntBASIC4.29□□□□□ -1.72
PAX9P55771 AC069306.1-201ENST00000507006 843 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms