Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC087783.2-201ENST00000605070 562 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AC024940.4-201ENST00000605507 246 ntBASIC5.07□□□□□ -1.6
CDH4P55283 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 AL049539.1-201ENST00000611964 459 ntBASIC5.07□□□□□ -1.6
CDH4P55283 BX005214.3-202ENST00000619809 325 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH4P55283 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH4P55283 AC011447.7-201ENST00000624228 1590 ntBASIC5.07□□□□□ -1.6
CDH4P55283 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH4P55283 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CDH4P55283 THAP12P8-201ENST00000447914 2115 ntBASIC5.06□□□□□ -1.6
CDH4P55283 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CDH4P55283 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH4P55283 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CDH4P55283 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH4P55283 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH4P55283 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH4P55283 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CDH4P55283 AC013442.1-201ENST00000397347 228 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC093414.1-201ENST00000434712 514 ntBASIC5.06□□□□□ -1.6
CDH4P55283 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH4P55283 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH4P55283 SCAND3P1-201ENST00000439854 1060 ntBASIC5.06□□□□□ -1.6
CDH4P55283 SLC25A18P1-201ENST00000449385 454 ntBASIC5.06□□□□□ -1.6
CDH4P55283 RPS3AP53-201ENST00000454716 778 ntBASIC5.06□□□□□ -1.6
CDH4P55283 MTND6P32-201ENST00000457611 483 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC245028.2-201ENST00000458673 253 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC116562.1-201ENST00000485355 781 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH4P55283 AC093890.1-201ENST00000502554 540 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH4P55283 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH4P55283 AC113398.2-201ENST00000507630 558 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AP002981.1-201ENST00000517692 975 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC105031.1-201ENST00000518550 476 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH4P55283 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH4P55283 AL359219.2-201ENST00000555184 348 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC009117.1-201ENST00000563948 554 ntBASIC5.06□□□□□ -1.6
CDH4P55283 BGLT3-201ENST00000564523 994 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH4P55283 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH4P55283 AC020910.3-201ENST00000603701 874 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC074140.1-201ENST00000621617 208 ntBASIC5.06□□□□□ -1.6
CDH4P55283 AC243960.7-201ENST00000623532 707 ntBASIC5.06□□□□□ -1.6
CDH4P55283 CR381572.2-201ENST00000624852 397 ntBASIC5.06□□□□□ -1.6
CDH4P55283 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CDH4P55283 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDH4P55283 AC068446.1-201ENST00000556425 1549 ntBASIC5.06□□□□□ -1.6
CDH4P55283 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDH4P55283 PCAT14-202ENST00000627127 3935 ntBASIC5.06□□□□□ -1.6
CDH4P55283 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CDH4P55283 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH4P55283 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH4P55283 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH4P55283 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 BTBD10P1-201ENST00000549824 1352 ntBASIC5.05□□□□□ -1.6
CDH4P55283 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH4P55283 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH4P55283 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
CDH4P55283 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 RNU6-1263P-201ENST00000384601 106 ntBASIC5.05□□□□□ -1.6
CDH4P55283 RNU6-1320P-201ENST00000390838 107 ntBASIC5.05□□□□□ -1.6
CDH4P55283 RNU6-1269P-201ENST00000391139 107 ntBASIC5.05□□□□□ -1.6
CDH4P55283 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH4P55283 RAB9AP4-201ENST00000415230 609 ntBASIC5.05□□□□□ -1.6
CDH4P55283 SETP10-201ENST00000424368 814 ntBASIC5.05□□□□□ -1.6
CDH4P55283 AC104837.2-201ENST00000427236 424 ntBASIC5.05□□□□□ -1.6
CDH4P55283 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH4P55283 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH4P55283 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH4P55283 OR52J1P-201ENST00000450596 932 ntBASIC5.05□□□□□ -1.6
CDH4P55283 AC093166.2-201ENST00000455969 1017 ntBASIC5.05□□□□□ -1.6
CDH4P55283 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH4P55283 RNU6-599P-201ENST00000459383 107 ntBASIC5.05□□□□□ -1.6
CDH4P55283 RNU6-1193P-201ENST00000459461 107 ntBASIC5.05□□□□□ -1.6
CDH4P55283 RN7SL517P-201ENST00000462240 305 ntBASIC5.05□□□□□ -1.6
CDH4P55283 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH4P55283 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH4P55283 RNA5SP230-201ENST00000517039 122 ntBASIC5.05□□□□□ -1.6
CDH4P55283 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 AGGF1P9-201ENST00000561884 913 ntBASIC5.05□□□□□ -1.6
CDH4P55283 AC115989.2-201ENST00000578640 563 ntBASIC5.05□□□□□ -1.6
CDH4P55283 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 390.3 ms