Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU6-1119P-201ENST00000384349 108 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AC087752.1-201ENST00000391360 558 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AL031577.2-201ENST00000404133 280 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.31□□□□□ -1.4
EPHB3P54753 GTF2IP2-201ENST00000424290 697 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.31□□□□□ -1.4
EPHB3P54753 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.31□□□□□ -1.4
EPHB3P54753 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHB3P54753 CDC27P1-201ENST00000445384 715 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.31□□□□□ -1.4
EPHB3P54753 RN7SL57P-201ENST00000493687 290 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHB3P54753 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.31□□□□□ -1.4
EPHB3P54753 AC113430.1-201ENST00000506872 718 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AC005178.1-201ENST00000508392 440 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHB3P54753 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 DUXAP2-201ENST00000519198 589 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.31□□□□□ -1.4
EPHB3P54753 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHB3P54753 AC010198.2-201ENST00000550612 259 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 DUXAP1-201ENST00000556632 463 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AC091078.2-201ENST00000557145 559 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHB3P54753 RN7SL622P-201ENST00000585292 275 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 OR4G1P-201ENST00000588632 938 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.31□□□□□ -1.4
EPHB3P54753 AL031281.1-201ENST00000604049 488 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AC005377.1-201ENST00000605126 456 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 AC009237.15-201ENST00000610252 501 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.31□□□□□ -1.4
EPHB3P54753 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.31□□□□□ -1.4
EPHB3P54753 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
EPHB3P54753 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.31□□□□□ -1.4
EPHB3P54753 PDZK1P1-202ENST00000425209 1350 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 AC079753.1-201ENST00000623243 3868 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 AL929601.4-201ENST00000613011 1341 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 ZNF833P-201ENST00000424938 1494 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 SNORA51.1-201ENST00000363243 140 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 RNU6-1005P-201ENST00000384519 107 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 SNORA26.8-201ENST00000391306 124 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AC005522.1-201ENST00000395416 346 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 DEFB108C-201ENST00000400154 252 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHB3P54753 SDHDP6-201ENST00000414693 480 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 AC126120.1-201ENST00000431082 470 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 MTND3P23-201ENST00000431980 347 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHB3P54753 RPS27P5-201ENST00000444247 244 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AL606662.1-201ENST00000445763 553 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHB3P54753 RPL5P32-201ENST00000454085 879 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 RNU6-956P-201ENST00000458868 103 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AC138853.1-201ENST00000503549 823 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AC008629.2-201ENST00000503783 483 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHB3P54753 DSTNP2-201ENST00000504533 515 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHB3P54753 AC021146.7-201ENST00000509604 775 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHB3P54753 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 AC118273.2-201ENST00000532092 465 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHB3P54753 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
EPHB3P54753 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHB3P54753 OR11H3P-201ENST00000554547 982 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AL049830.4-201ENST00000555149 351 ntBASIC6.3□□□□□ -1.4
EPHB3P54753 AC006530.1-201ENST00000555980 571 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms